Table 2 Microarray and real time PCR analysis showing a limited list of genesa predicted to be PreAB activated
From: Genome-wide analysis of the PreA/PreB (QseB/QseC) regulon of Salmonella enterica serovar Typhimurium
ORF | Gene | Function | Microarray Ab Md (fold change) | Microarray Bc M (fold change) | qRT-PCRe |
|---|---|---|---|---|---|
STM3707 | yibD | putative glycosyltransferase | 0.8 (1.7) | 6.1 (68.6) | NP f |
STM3176 | ygiW | Membrane protein (DUF388; exporter?) | 4.5 (22.6) | 5.2 (36.8) | 355 |
STM1253 | Â | Cytochrome b561 (Ni2+ dependent) | 2.9 (7.5) | 4.9 (29.9) | 372 |
STM1595 | srfC | ssrAB activated gene; predicted coiled-coil structure | 4.3 (19.7) | 4.7 (26.0) | 1.2 |
STM3175 | Â | putative bacterial regulatory helix-turn-helix proteins, AraC family | 3.6 (12.1) | 4.4 (21.1) | 605.3 |
STM1685 | ycjX | putative ATPase | 2.3 (4.9) | 3.8 (13.9) | 37.7 |
STM1252 | Â | putative cytoplasmic protein | 1.5 (2.8) | 2.8 (7.0) | 8.6 |
STM3179 | mdaB | NADPH specific quinone oxidoreductase (drug modulator) | 1.0 (2.0) | 2.8 (7.0) | 32.5 |
STM1684 | ycjF | putative inner membrane protein | 1.1 (2.1) | 2.6 (6.1) | 61.2 |
STM4291 | pmrB | sensory kinase in two-component regulatory system with PmrA | ND g | 2.1 (4.3) | NP |
STM2080 | udg | UDP-glucose/GDP-mannose dehydrogenase | ND | 1.8 (3.5) | 23.2 |
STM4292 | pmrA | response regulator in two-component regulatory system with PmrB | ND | 1.7 (3.2) | NP |
STM4118 | yijP (cptA) | putative integral membrane protein | ND | 1.5 (2.8) | 32.8 |
STM0628 | pagP | PhoP-activated gene, palmitoyl transferase | ND | 1.1 (2.1) | NP |
STM2238 | Â | putative phage protein | 0.9 (1.9) | 1.0 (2.0) | NP |