Table 2 Frequency of 27 shared spoligotypes (SITs) according to Brudey et al. [21] identified in 158 INH resistant M. tuberculosis strains isolated from South America.
SIT | Octal | Strains in this n | Strains in n | Lineag | ||
|---|---|---|---|---|---|---|
1 | 0000000000037 | 3 | 1.3 | 5610 | 13.2 | Beijing |
47 | 7777777740207 | 6 | 2.6 | 1021 | 2.4 | Haarlem |
602 | 7777777700007 | 2 | 0.9 | 48 | 0.1 | U |
50 | 7777777777207 | 19 | 8.5 | 2128 | 5.0 | Haarlem |
49 | 7777777777207 | 3 | 1.3 | 115 | 0.3 | Haarlem3 |
20 | 6777776077607 | 9 | 4.0 | 588 | 1.4 | LAM |
17 | 6777376077607 | 6 | 2.4 | 473 | 1.1 | LAM |
33 | 7761776077607 | 8 | 3.6 | 770 | 1.8 | LAM |
4 | 0000000077607 | 3 | 1.3 | 220 | 0.5 | LAM3/S |
211 | 5761776077607 | 2 | 0.9 | 63 | 0.1 | LAM |
828 | 3777776077607 | 3 | 1.3 | 20 | 0.0 | LAM |
93 | 7777376077607 | 10 | 4.5 | 267 | 0.6 | LAM |
64 | 7777776075607 | 9 | 4.0 | 157 | 0.4 | LAM |
435 | 7637776077607 | 3 | 1.3 | 4 | 0.0 | LAM |
177 | 3777776077607 | 3 | 1.3 | 50 | 0.1 | LAM |
388 | 7377776077607 | 2 | 0.9 | 15 | 0.0 | LAM |
42 | 7777776077607 | 22 | 9.9 | 1926 | 4.5 | LAM |
1938 | 7763777777607 | 7 | 3.1 | 3 | 0.0 | S |
53 | 7777777777607 | 17 | 7.6 | 3738 | 8.8 | T1 |
397 | 7777776000007 | 2 | 0.9 | 13 | 0.0 | U |
402 | 7777776000000 | 3 | 1.3 | 14 | 0.0 | U |
1241 | 7777776077007 | 3 | 1.3 | 28 | 0.0 | U |
119 | 7777767777607 | 2 | 0.9 | 659 | 1.8 | X1 |
137 | 7777767777606 | 3 | 1.3 | 720 | 2.0 | X2 |
92 | 7000767777607 | 3 | 1.3 | 328 | 0.8 | X3 |
91 | 7000367777607 | 2 | 0.9 | 143 | 0.4 | X3 |
60 | 7777776077607 | 3 | 1.3 | 83 | 0.2 | LAM |