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Table 4 Summary of differentially regulated genes in the biofilm-batch comparison

From: A Candida albicans early stage biofilm detachment event in rich medium

Process GO Term Genes on microarray dataset Annotated Genes1 P value
  1h-biofilm 3h-biofilm   1h-biofilm 3h-biofilm
Up regulated genes 130 127    
Lipid metabolism 21 18    
Ergosterol biosynthesis 11 9 28 1.82 E-10 6.67 E-08
Fatty acid metabolism 3 4 74 0.2 0.1
Other lipid metabolism 7 5 - - -
Glycolysis 13 7 16 5.74 E-18 1.75 E-07
Fermentation 3 2 16 0.01 0.07
Amino acid biosynthesis 11 5 205   
Glutamate 5 1 13 2.37 E-05 0.27
Leucine 2 0 5 8.21 E-03 -
Other 4 4 - - -
Transport 12 4    
Glucose transport 5 0 21 3 E-04 -
Oligopeptide transport 3 0 11 3 E-03 -
Other 4 4 - - -
Cell wall 8 8 92 4.5 E-03 7.7 E-03
Protein refolding 0 5 14 - 9 E-05
Down regulated genes 71 95    
Translation (cytosolic ribosome) 11 33 105   
Large subunit 8 18 50 9.08 E-05 8.1 E-15
Small subunit 3 15 39 0.08 4.68 E-13
Tricarboxylic acid cycle 6 2 20 1.75 E-05 0.11
Amino acid biosynthesis 3 13    
Glutamate 0 4 13 - 6.2 E-04
Leucine 0 2 5   9 E-03
Other 3 7 - - -
ATP synthesis 6 9 20 1.75 E-05 4.9 E-09
Respiratory chain 8 11 26 5.36 E-07 2.02 E-10
Stress response 4 5 - - -
  1. 1Number of genes in the annotated database