Table 3 Classes of biological processes involving up regulatedpig gene homologues (p-value < 0.01) in brain and lung tissues infected with wild type PRV.
From: Global transcriptional response of pig brain and lung to natural infection by Pseudorabies virus
Biological Process | Library | Brain Pig Unigene Matches over 60 base-pairs (gene homologues) | Brain Pig Ungene Matches between 50- 59b base-pairs (gene homologues) | Lung Pig Unigene Matches over 60 base-pairs (gene homologues) | Lung Pig Unigene Matches between 50-59b base-pairs (gene homologues) |
|---|---|---|---|---|---|
Apoptosis | 230 | 3* | 0 | 30* | 4 |
Biological function unknown | 472 | 4 | 0 | 31 | 10 |
Cation transport | 139 | 2* | 3* | 0 | 2 |
Cell adhesion | 429 | 8* | 5* | 11 | 4 |
Cell cycle | 303 | 3 | 0 | 31* | 3 |
Cell differentiation | 230 | 4* | 1* | 7 | 2 |
Immune response | 255 | 0 | 0 | 7 | 3 |
Intracellular protein transport | 135 | 5* | 0 | 16* | 5* |
Intracellular signaling cascade | 285 | 4* | 0 | 14 | 3 |
Ion transport | 304 | 5* | 1 | 6 | 4 |
Metabolism | 280 | 3* | 3 | 15* | 9* |
Nervous system development | 239 | 9* | 3* | 9 | 3 |
Protein amino acid dephosphorylation | 108 | 1 | 2* | 14* | 1 |
Protein amino acid phosphorylation | 412 | 1 | 2* | 29 | 7 |
Protein folding | 165 | 4* | 0 | 27* | 5* |
Protein transport | 217 | 2 | 2* | 33* | 4 |
Proton transport | 47 | 1* | 2* | 3 | 7* |
Regulation of progression through cell cycle | 215 | 2 | 2* | 20* | 4 |
Regulation of transcription, DNA dependent | 1285 | 9 | 2 | 73 | 7 |
Signal transduction | 1110 | 6 | 1 | 40 | 6 |
Synaptic transmission | 164 | 4* | 4* | 5 | 1 |
Transcription | 945 | 7 | 1 | 63 | 7 |
Ubiquitin cycle | 217 | 1 | 0 | 30* | 4 |