Table 1 Size and %GC Content, accessory Genes contained in and the location and environment of isolated strains containing Tn4371-like ICEs fromβ-Proteobacteria
From: Novel Tn4371-ICE like element in Ralstonia pickettiiand Genome mining for comparative elements
Tn4371-like Elements | Size | %GC Content | Location | Environment | Accessory Genes | Reference | Name | Accession Number |
|---|---|---|---|---|---|---|---|---|
Ralstonia pickettii 12J | 54121 bp | 64.63 | USA | Copper-contaminated sediment from a lake | Lipid metabolism | [74] | ICETn43716033 | CP001068 |
Acidovorax avenae subsp. citrulli AAC00-1 | 59844 bp | 63.12 | USA | Watermelon | Insertion Sequences metabolism | [75] | ICETn43716036 | NC_008752 |
Delftia acidovorans SPH-1 | 57901 bp | 63.66 | Germany | Activated sludge | czc metal resistance pumps | [76] | ICETn43716037 | NC_010002 |
Comamonas testosteroni KF-1 | 52455 bp | 63.77 | Switzerland | Activated sludge | czc metal resistance pumps | [76] | ICETn43716038 | NZ_AAUJ0100000 |
Acidovorax sp. JS42 | 53489 bp | 62.88 | USA | Groundwater | Multidrug resistance pump Insertion Sequences | [77] | ICETn43716039 | NC_008782 |
Bordetella petrii DSM12804 | 47191 bp | 63.73 | Germany | River sediment | Aromatic compounds metabolism | [78] | ICETn43716040 | NC_010170 |
Burkholderia pseudomallei MSHR346 | 49278 bp | 62.21 | Australia | Melioidosis patient | metabolism | N/A | ICETn43716064 | CP001408 |
Polaromonas naphthalenivorans CJ2 plasmid pPNAP01 | 70106 bp | 62.89 | USA | Coal-tar-waste contaminated site | Biphenyl degradation | [79] | ICETn43716065 | CP000530 |
Diaphorobacter sp. TPSY | 49020 bp | 65.30 | USA | Soil | czc metal resistance pumps | [80] | ICETn43716066 | CP001392 |
Delftia acidovorans SPH-1 | 66755 bp | 64.94 | Germany | Activated sludge | Various types of metal resistance pumps | [76] | ICETn43716067 | NC_010002 |