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Table 6 Presumptive Cronobacter spp. as appeared through testing the isolates by biochemical profiling (API20E), chromogenic (α-MUG, DFI, EsPM) and eight sets of Cronobacter spp- specific primers (α-gluA, α-gluB, SG, SI, Saka, OmpA, zpx and BAM), while confirmed as non-Cronobacter spp. by 16S rRNA sequence analysis.

From: Isolation of Cronobacter spp. (formerly Enterobacter sakazakii) from infant food, herbs and environmental samples and the subsequent identification and confirmation of the isolates using biochemical, chromogenic assays, PCR and 16S rRNA sequencing

Isolate

    

PCR Primers

 

ID

Source

API 20E

α-MUG

DFI

EsP M

α-GluA

α-GluB

SG

SI

Saka

OmpA

zpx

BAM€

16S rRNA

Jor20A

Spices

+

-

-

Clear

-

ND

+

+

-

-

+

-

N.Crono

Jor27

Chamomile

+

-

-

Y&

-

ND

+

+

-

-

+

-

N.Crono

Jor45

Sugar

+

-

-

Gray

-

ND

+

+

-

-

+

-

N.Crono

Jor115A

Dates

+

+

NG@

Y/Gr

-

ND

-

-

-

-

+

-

N.Crono

Jor115B

Dates

+

+

NG@

Y/Gr

-

ND

-

-

-

-

+

-*#

N.Crono

Jor51

Dry dairy

+

+

+

Y/Gr##

-

ND

+

+

-

-

+

- #

N.Crono

Jor153B

Semolina

+

+

+

BB

-

-

+

+

-

-

+

-

N.Crono

Jor26

Rice

+

-

-

BB

-

-

+

+

-

-

+

+

N.Crono

Jor100

Semolina

+

-

-

BB

+

ND

+

+

-

-

+

+

N.Crono

Jor103

Spices

+

-

-

BB

+

ND

+

+

-

-

+

+

N.Crono

Jor109

Grapes

+

-

-

BB

+

ND

+

+

-

-

+

+

N.Crono

Jor168

Spices

+

-

-

BB

-

-

+

+

-

-

+

+

N.Crono

Jor151

Fennel

+

+

+

BB

-

+

-

-

-

-

+

+

N.Crono

Total +

 

13

5

3

7

3

1

10

10

0

0

13

6

 
  1. € The PCR conditions for BAM primers as described in Table 1 were used for amplification of both regions of the zpx gene as described by Kothary et al. [13]. * multiple bands. *#, PCR product was approximately (400 bp) and sequence was found not to be zpx. & Y, yellow colony chromogenic reaction color, 24 h at 37°C. Gr, green colony chromogenic reaction color, 24 h at 37°C. @ NG; no growth on DFI at 37°C. ##Colonies were blue black (BB) after three days at 37°C. N. Corono; None Cronobacter spp.