From: Regulation of phenylacetic acid degradation genes of Burkholderia cenocepacia K56-2
Strain or plasmid | Features | Reference or source |
---|---|---|
B. cenocepacia strains | Â | Â |
K56-2 (LMG18863) | ET12 clone related to J2315, CF clinical isolate | [43] |
JNRH1 | K56-2BCAL0210::pJH9, Tpr | This study |
E. coli strains | Â | Â |
DH5α | F-, ϕ 80 lac ZΔM15 endA1 recA1 hsdR 17(rK-mK+)supE 44 thi- 1 ΔgyrA 96 (ΔlacZYA-arg F)U169 relA 1 | Invitrogen |
SY327 | araD Δ(lac pro) argE (Am) recA 56 Rifr nalA λ pir | [40] |
Plasmids | Â | Â |
pGPΩTp | ori r6K, ΩTpr mob+ | [27] |
pRK2013 | oricolE1, RK2 derivative, Kmr mob+ tra+ | [42] |
pJH9 | pGPΩTp, internal fragment from BCAL0210 | This study |
pJH1 | pap20, eGFP | [9] |
pJH2 | pJH1, eGFP replaced promoter with multiple cloning site | This study |
pJH5 | pJH2, BCAL0211 promoter region (P BCAL0211 ) | This study |
pJH6 | pJH2, paaZ promoter region (P paaZ ) | This study |
pJH7 | pJH2, paaA promoter region (P paaA ) | This study |
pJH8 | pJH2 paaH promoter region (P paaH ) | This study |
pJH10 | pJH7, ACCGACCGGTCGGT → TAGATGTATCTCAG | This study |
pJH11 | pJH7, ACCGACCGGTCGGT → TAGATGTGGTCGGT | This study |
pJH12 | pJH7, ACCGACCGGTCGGT → ACCGACCATCTCAG | This study |