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Table 3 Subdivision of the predominant types by the different typing techniques.

From: Occurrence of Mycobacterium avium subspecies paratuberculosis across host species and European countries with evidence for transmission between wildlife and domestic ruminants

Type No. of isolates1 Subdivided by
   BstEII RFLP2 PFGE3 MIRU-VNTR4
[2-1] 83 C1, C5, C9, C10, C17, C36, C38   1, 2, 5, 8, 19, 22, 24, 25, 30
[1-1] 15 C1, C5, C18   1, 2, 6
[29-15] 4 C1   36, 37
[34-22] 4 C1   2, 8
[2-30] 2 C16   25, 1
INMV 1 75 C1, C9, C16, C17 [1-1], [2-1], [2-10], [2-30], [3-2], [5-2], [20-1], [32-29], [33-20], [36-27], [41-1]  
INMV 2 35 C1, C5, C17, C18, C22, C27, C36 [1-1], [2-1], [2-17], [2-19], [2-31], [27-18], [30-21], [34-22]  
INMV 26 9 C1 [15-25], [40-28]  
INMV 6 4 C1 [1-1], [2-21]  
INMV 25 2 C16, C17 [2-1], [2-30]  
INMV 8 2 C1 [2-1], [34-22]  
INMV 35 2 C1 [26-1], [58-64]  
C1 71   [1-1], [2-1], [2-10], [15-16], [15-25], [18-1], [20-1], [26-1], [29-15], [30-21], [34-22], [36-27], [40-28], [58-64] 1, 2, 6, 8, 13, 24, 26, 35, 36, 37, 38
C17 49   [2-1], [3-2], [5-2], [32-29] 1, 2, 19, 25
C5 5   [1-1], [2-1], [2-19] 2
C9 3   [2-1], [41-1] 1
C16 2   [2-30] 1, 25
  1. 1. 123 Map isolates were typed by IS900-RFLP, PFGE and MIRU-VNTR but not all isolates were typed by all three typing procedures.
  2. 2. Nomenclature as defined by Pavlik et al. 1999 [50]
  3. 3. Nomenclature as defined by Stevenson et al. (2002) [11]
  4. 4. INMV numbers as defined by INRA Nouzilly MIRU-VNTR [56]