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Table 1 Primers for amplification and sequencing of the seven housekeeping genes in L. hongkongensis

From: Development of a multi-locus sequence typing scheme for Laribacter hongkongensis, a novel bacterium associated with freshwater fish-borne gastroenteritis and traveler's diarrhea

Gene locus

Primers

Amplicon size (bp)

 

Forward

Reverse

 

rho

LPW868 5'-ATCGTCCTNNTGATTGACGAG-3'

LPW869 5'-GATGTTGATGGCCNGGAA-3'

468

acnB

LPW870 5'-GGCANGCCTTCGATTTCG-3'

LPW871 5'-GCGNCCGGGNACNTACTG-3'

561

ftsH

LPW872 5'-CGGTCGAAACGGCCNGGG-3'

LPW873 5'-CGGNTGNGACGAAGCCAA-3'

480

trpE

LPW1712 5'-ACGGNGACATCATGCAGG-3'

LPW1713 5'-NACNGCNGTGCGGATGGC-3'

626

ilvC

LPW1714 5'-GCNGCCAACGGCGGCACCAA-3'

LPW1715 5'-AAGGCATCATNGCNCGCAG-3'

473

thiC

LPW1716 5'-ATCATGGCCAANTGGTGTCT-3'

LPW1717 5'-GCCTTGNNNAGCGCGTTGTC-3'

557

eno

LPW3137 5'-CGCTGCGGGGCGGAAATCTT-3'

LPW2555 5'-CCAGATCAACGGCCTTGAGC-3'

517