Skip to main content

Table 5 Nucleotide sequence similarities (%) of the NC regions upstream of cadF (- like) gene(250 bp; upper right) and downstream of Cla_0387 (120 bp; lower left) among C. lari isolates

From: Structural analysis of the full-length gene encoding a fibronectin-binding-like protein (CadF) and its adjacent genetic loci within Campylobacter lari

  Campylobacter lari 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17
1 C.lari JCM2530T   98.8 98.8 98.4 87.3 89.7 89.7 88.1 88.6 89.1 86.5 87.5 87.5 87.9 87.8 87.9 98.8
2 C.lari 298 100.0   100.0 99.6 88.1 89.7 89.7 88.2 88.6 88.8 86.9 87.2 87.2 87.5 87.5 87.5 100.0
3 C.lari 300 100.0 100.0   99.6 88.1 89.7 89.7 88.2 88.6 88.8 86.9 87.2 87.2 87.5 87.5 87.5 100.0
4 C.lari 84C-1 100.0 100.0 100.0   87.8 89.3 89.3 87.8 88.2 88.4 86.5 86.8 86.8 87.1 87.0 87.1 99.6
5 UPTC 99 93.2 93.2 93.2 93.2   95.6 95.6 96.0 96.0 90.0 89.0 85.0 85.0 85.9 85.4 85.3 88.1
6 UPTC NCTC12892 93.2 93.2 93.2 93.2 98.3   100.0 96.8 97.6 91.3 89.7 86.6 86.6 87.0 87.0 87.3 89.7
7 UPTC NCTC12893 93.2 93.2 93.2 93.2 98.3 100.0   96.8 97.6 91.3 89.7 86.6 86.6 87.0 87.0 87.3 89.7
8 UPTC NCTC12894 93.2 93.2 93.2 93.2 100.0 98.3 98.3   98.4 93.2 89.0 86.3 86.3 86.7 86.6 87.0 88.2
9 UPTC NCTC12895 93.2 93.2 93.2 93.2 99.2 97.4 97.4 99.2   92.5 89.4 85.6 85.6 85.9 85.9 86.2 88.6
10 UPTC NCTC12896 88.1 88.1 88.1 88.1 92.4 90.7 90.7 92.4 91.5   86.5 92.3 92.3 92.7 92.7 93.1 88.8
11 UPTC CF89-12 89.7 89.7 89.7 89.7 91.5 91.5 91.5 91.5 90.6 85.6   85.5 85.5 85.5 85.4 85.7 86.9
12 UPTC A1 88.1 88.1 88.1 88.1 92.4 90.7 90.7 92.4 91.5 100.0 85.6   100.0 99.2 98.8 99.2 87.2
13 UPTC A2 88.1 88.1 88.1 88.1 92.4 90.7 90.7 92.4 91.5 100.0 85.6 100.0   99.2 98.8 99.2 87.2
14 UPTC A3 88.1 88.1 88.1 88.1 92.4 90.7 90.7 92.4 91.5 100.0 85.6 100.0 100.0   99.2 99.2 87.5
15 UPTC 89049 88.1 88.1 88.1 88.1 92.4 90.7 90.7 92.4 91.5 100.0 85.6 100.0 100.0 100.0   98.8 87.5
16 UPTC 92251 88.1 88.1 88.1 88.1 92.4 90.7 90.7 92.4 91.5 100.0 85.6 100.0 100.0 100.0 100.0   87.5
17 C. lari RM2100 100.0 100.0 100.0 100.0 93.2 93.2 93.2 93.2 93.2 88.1 89.7 88.1 88.1 88.1 88.1 88.1  
  1. NC, non-coding.