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Table 2 The 15 proteins with opposite abundance trends.

From: Pathway analysis for intracellular Porphyromonas gingivalis using a strain ATCC 33277 specific database

PGN0148 conserved domain protein
PGN0152 immunoreactive 61 kDa antigen PG91
PGN0294 ragB lipoprotein RagB
PGN0302 rubrerythrin
PGN0503 mmdC methylmalonyl-CoA decarboxylase gamma subunit
PGN0678 thiL thiamine monophosphate kinase
PGN0914 peptidase M24 family
PGN1032 hypothetical protein PG_0914
PGN1403 acetylornithine aminotransferase putative
PGN1529 oxidoreductase putative
PGN1590 rplM ribosomal protein L13
PGN1830 TonB-dependent receptor putative
PGN1849 rplO ribosomal protein L15
PGN1904 hemagglutinin protein HagB
PGN2070 hypothetical protein PG_2204
  1. Out of 1,113 detected (see Table 1) using both annotations, these 15 proteins showed inconsistent trends for significant (q ≤ 0.01) abundance change depending on whether the W83 [10] or ATCC 33277 [11] genome annotations were used for database searching. The ORF numbers and descriptors given are those for ATCC 33277.