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Figure 3 | BMC Microbiology

Figure 3

From: CAPIH: A Web interface for comparative analyses and visualization of host-HIV protein-protein interactions

Figure 3

(A) Statistics of species-specific changes in different regions. Each filled block represents ~10 species-specific genetic changes. AA: amino acid; IPR: Interpro-predicted protein domain; CDS: coding sequence; 3/5 UTR: 3'/5' untranslated regions. (B) Multiple amino acid sequence alignment wherein species-specific changes (PTMs, and substitutions) and InterPro domains are shown in colored boxes. Indels are not color-shaded. The colors can be shown or hidden by checking the boxes in the "Feature Settings" panel. The user can obtain more information of each color shaded amino acid residue by pointing the cursor to the residue of interest. Shown in the figure is a mouse-specific phosphorylation event predicted by KinasePhos at position 984. The user can also choose to view the nucleotide sequence alignments in 5'/3' UTR or coding sequence by clicking on the hyperlinks in the left panel.

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