Functional class | Metabolic pathway | Gene | Protein | Induction/repression by Asa | |
---|---|---|---|---|---|
T. arsenivorans | Thiomonas sp. 3As | ||||
Energy and carbon metabolism | Calvin Cycle | rbcL | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | + | - |
cbbFC1 | Fructose-1,6-bisphosphatase | + | 0 | ||
cbbA1 | Fructose biphosphate aldolase | 0 | - | ||
TCA cycle/reductive carboxylate cycle | icd | Isocitrate dehydrogenase, specific for NADP+ | + | 0 | |
Glyoxylate and dicarboxylate metabolism | aceB | Malate synthase A | + | 0 | |
gltA | Citrate synthase | + | 0 | ||
aceA | Isocitrate lyase | 0 | + | ||
/ | Tartrate dehydrogenase/decarboxylase (TDH) (D-malate dehydrogenase [decarboxylating]) | 0 | + | ||
Glycolyse/gluconeogenesis | ppsA | Phosphoenolpyruvate synthase | + | - | |
aceE | Pyruvate dehydrogenase E1 component | + | - | ||
lpdA | Dihydrolipoyl dehydrogenase (Pyruvate dehydrogenase E3 component) | + | 0 | ||
eno2 | Enolase | 0 | - | ||
Thiosulfate oxydation | / | Putative sulfur oxidation protein SoxB | 0 | - | |
Cellular processes, transport and binding proteins | Arsenic resistance | arsA2 | Arsenical pump-driving ATPase | + | 0 |
arsC1 | Arsenate reductase | 0 | + | ||
High temperature resistance | hldD | ADP-L-glycero-D-manno-heptose-6-epimerase | + | 0 | |
General stress | groL | GroEL, 60 kDa chaperonin | + | 0 | |
Other stresses | ahpF | Alkyl hydroperoxide reductase subunit F | 0 | - | |
Twitching/motility/secretion | / | Putative methyl-accepting chemotaxis protein | 0 | - | |
/ | Putative type IV pilus assembly protein PilM | 0 | - | ||
Cell division | / | Putative cell division protein | 0 | - | |
DNA metabolism, transcription and protein synthesis | DNA bending, supercoiling, inversion | gyrA | DNA gyrase subunit A | + | - |
RNA degradation | pnp | Polyribonucleotide nucleotidyltransferase | + | - | |
Protein synthesis | fusA | Elongation factor G (EF-G) | + | 0 | |
tufA | Elongation factor Tu | + | 0 | ||
rpsB | 30S ribosomal protein S2 | + | 0 | ||
rpsA | 30S ribosomal protein S1 | 0 | - |