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Table 2 Arsenic-induced or repressed proteins in T. arsenivorans and Thiomonas sp. 3As.

From: Carbon and arsenic metabolism in Thiomonas strains: differences revealed diverse adaptation processes

Functional class Metabolic pathway Gene Protein Induction/repression by Asa
     T. arsenivorans Thiomonas sp. 3As
Energy and carbon metabolism Calvin Cycle rbcL Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit + -
   cbbFC1 Fructose-1,6-bisphosphatase + 0
   cbbA1 Fructose biphosphate aldolase 0 -
  TCA cycle/reductive carboxylate cycle icd Isocitrate dehydrogenase, specific for NADP+ + 0
  Glyoxylate and dicarboxylate metabolism aceB Malate synthase A + 0
   gltA Citrate synthase + 0
   aceA Isocitrate lyase 0 +
   / Tartrate dehydrogenase/decarboxylase (TDH) (D-malate dehydrogenase [decarboxylating]) 0 +
  Glycolyse/gluconeogenesis ppsA Phosphoenolpyruvate synthase + -
   aceE Pyruvate dehydrogenase E1 component + -
   lpdA Dihydrolipoyl dehydrogenase (Pyruvate dehydrogenase E3 component) + 0
   eno2 Enolase 0 -
  Thiosulfate oxydation / Putative sulfur oxidation protein SoxB 0 -
Cellular processes, transport and binding proteins Arsenic resistance arsA2 Arsenical pump-driving ATPase + 0
   arsC1 Arsenate reductase 0 +
  High temperature resistance hldD ADP-L-glycero-D-manno-heptose-6-epimerase + 0
  General stress groL GroEL, 60 kDa chaperonin + 0
  Other stresses ahpF Alkyl hydroperoxide reductase subunit F 0 -
  Twitching/motility/secretion / Putative methyl-accepting chemotaxis protein 0 -
   / Putative type IV pilus assembly protein PilM 0 -
  Cell division / Putative cell division protein 0 -
DNA metabolism, transcription and protein synthesis DNA bending, supercoiling, inversion gyrA DNA gyrase subunit A + -
  RNA degradation pnp Polyribonucleotide nucleotidyltransferase + -
  Protein synthesis fusA Elongation factor G (EF-G) + 0
   tufA Elongation factor Tu + 0
   rpsB 30S ribosomal protein S2 + 0
   rpsA 30S ribosomal protein S1 0 -
  1. a + and -: these proteins are more or less abundant in the presence of As(III), respectively. 0: no difference observed (for details, see Additional File 1).