Table 2 List of strains and population affinity based on STRUCTURE analysis
Strain ID | Disease | Ethnic origin | Population affinity (%)$ | Population | subpopulation |
|---|---|---|---|---|---|
FD418i | Functional dyspepsia | Indian | 81 | hpAsia2 | hspIndia |
FD423i | Functional dyspepsia | Indian | 72 | hpAsia2 | hspIndia |
FD430i | Functional dyspepsia | Indian | 78 | hpAsia2 | hspIndia |
FD434i | Functional dyspepsia | Indian | 96 | hpEastAsia | hspMaori |
FD483i | Functional dyspepsia | Indian | 84 | hpAsia2 | hspIndia |
FD509i | Functional dyspepsia | Indian | 77 | hpAsia2 | hspIndia |
FD511i | Functional dyspepsia | Indian | 75 | hpAsia2 | hspIndia |
FD517i | Functional dyspepsia | Indian | 78 | hpAsia2 | hspIndia |
FD520i | Functional dyspepsia | Indian | 83 | hpAsia2 | hspIndia |
FD524i | Functional dyspepsia | Indian | 54 | hpEurope | AE2 |
FD528i | Functional dyspepsia | Indian | 77 | hpAsia2 | hspIndia |
FD532i | Functional dyspepsia | Indian | 46 | hpEurope | AE1 |
FD533i | Functional dyspepsia | Indian | 71 | hpAsia2 | hspIndia |
FD535i | Functional dyspepsia | Indian | 88 | hpAsia2 | hspIndia |
FD539i | Functional dyspepsia | Indian | 62 | hpEurope | AE1 |
FD540i | Functional dyspepsia | Indian | 67 | hpEurope | AE2 |
FD541i | Functional dyspepsia | Indian | 81 | hpAsia2 | hspIndia |
FD542i | Functional dyspepsia | Indian | 40 | hpEurope | AE1 |
FD543i | Functional dyspepsia | Indian | 86 | hpAsia2 | hspIndia |
FD546i | Functional dyspepsia | Indian | 81 | hpAsia2 | hspIndia |
FD550i | Functional dyspepsia | Indian | 48 | hpEurope | AE2 |
FD556i | Functional dyspepsia | Indian | 82 | hpAsia2 | hspIndia |
FD560i | Functional dyspepsia | Indian | 90 | hpEastAsia | hspEAsia |
FD563i | Functional dyspepsia | Indian | 54 | hpEurope | AE2 |
FD572i | Functional dyspepsia | Indian | 97 | hpEastAsia | hspEAsia |
FD574i | Functional dyspepsia | Indian | 82 | hpAsia2 | hspIndia |
FD575i | Functional dyspepsia | Indian | 86 | hpAsia2 | hspIndia |
FD584i | Functional dyspepsia | Indian | 85 | hpAsia2 | hspIndia |
FD585i | Functional dyspepsia | Indian | 71 | hpAsia2 | hspIndia |
FD604i | Functional dyspepsia | Indian | 88 | hpAsia2 | hspIndia |
FD607i | Functional dyspepsia | Indian | 84 | hpAsia2 | hspIndia |
FD608i | Functional dyspepsia | Indian | 83 | hpAsia2 | hspIndia |
FD616i | Functional dyspepsia | Indian | 50 | hpEurope | AE2 |
FD619i | Functional dyspepsia | Indian | 79 | hpAsia2 | hspIndia |
GC48i | Functional dyspepsia | Indian | 95 | hpEastAsia | hspEAsia |
FD452c | Functional dyspepsia | Chinese | 91 | hpEastAsia | hspEAsia |
FD493c | Functional dyspepsia | Chinese | 63 | hpEurope | AE2 |
FD506c | Functional dyspepsia | Chinese | 97 | hpEastAsia | hspEAsia |
FD507c | Functional dyspepsia | Chinese | 96 | hpEastAsia | hspEAsia |
FD513c | Functional dyspepsia | Chinese | 86 | hpEastAsia | hspEAsia |
FD519c | Functional dyspepsia | Chinese | 89 | hpEastAsia | hspEAsia |
FD529c | Functional dyspepsia | Chinese | 97 | hpEastAsia | hspEAsia |
FD536c | Functional dyspepsia | Chinese | 95 | hpEastAsia | hspEAsia |
FD537c | Functional dyspepsia | Chinese | 92 | hpEastAsia | hspEAsia |
FD566c | Functional dyspepsia | Chinese | 95 | hpEastAsia | hspEAsia |
FD568c | Functional dyspepsia | Chinese | 93 | hpEastAsia | hspEAsia |
FD576c | Functional dyspepsia | Chinese | 98 | hpEastAsia | hspEAsia |
FD577c | Functional dyspepsia | Chinese | 85 | hpEastAsia | hspEAsia |
FD586c | Functional dyspepsia | Chinese | 93 | hpEastAsia | hspEAsia |
FD595c | Functional dyspepsia | Chinese | 83 | hpEastAsia | hspEAsia |
FD599c | Functional dyspepsia | Chinese | 94 | hpEastAsia | hspEAsia |
FD605c | Functional dyspepsia | Chinese | 93 | hpEastAsia | hspEAsia |
FD613c | Functional dyspepsia | Chinese | 95 | hpEastAsia | hspEAsia |
FD618c | Functional dyspepsia | Chinese | 90 | hpEastAsia | hspEAsia |
FD622c | Functional dyspepsia | Chinese | 83 | hpEastAsia | hspEAsia |
GC17c | Gastric Cancer | Chinese | 89 | hpEastAsia | hspEAsia |
GC26c | Gastric Cancer | Chinese | 92 | hpEastAsia | hspEAsia |
GC29c | Functional dyspepsia | Chinese | 95 | hpEastAsia | hspEAsia |
GC32c | Gastric Cancer | Chinese | 89 | hpEastAsia | hspEAsia |
GC36c | Gastric Cancer | Chinese | 88 | hpEastAsia | hspEAsia |
GC51c | Gastric Cancer | Chinese | 94 | hpEastAsia | hspEAsia |
GC52c | Gastric Cancer | Chinese | 95 | hpEastAsia | hspEAsia |
FD419m | Functional dyspepsia | Malay | 56 | hpEurope | AE1 |
FD433m | Functional dyspepsia | Malay | 57 | hpEurope | AE1 |
FD477m | Functional dyspepsia | Malay | 73 | hpAsia2 | hspIndia |
FD527m | Functional dyspepsia | Malay | 88 | hpEastAsia | hspMaori |
FD544m | Functional dyspepsia | Malay | 59 | hpEurope | AE1 |
FD559m | Functional dyspepsia | Malay | 69 | hpAfrica1 | unknown |
FD589m | Functional dyspepsia | Malay | 86 | hpAsia2 | hspIndia |
FD662m | Functional dyspepsia | Malay | 86 | hpAsia2 | hspIndia |
FD703m | Functional dyspepsia | Malay | 83 | hpAsia2 | hspIndia |
FD710m | Functional dyspepsia | Malay | 83 | hpAsia2 | hspIndia |
FD711m | Functional dyspepsia | Malay | 73 | hpAsia2 | hspIndia |
FD719m | Functional dyspepsia | Malay | 75 | hpAsia2 | hspIndia |
FD725m | Functional dyspepsia | Malay | 82 | hpAsia2 | hspIndia |
FD728m | Functional dyspepsia | Malay | 97 | hpEastAsia | hspEAsia |
GC008m | Functional dyspepsia | Malay | 53 | hpEurope | AE2 |
GC014m | Gastric Cancer | Malay | 89 | hpAsia2 | hspIndia |