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Table 2 List of strains and population affinity based on STRUCTURE analysis

From: Population structure of Helicobacter pylori among ethnic groups in Malaysia: recent acquisition of the bacterium by the Malay population

Strain ID Disease Ethnic origin Population affinity (%)$ Population subpopulation
FD418i Functional dyspepsia Indian 81 hpAsia2 hspIndia
FD423i Functional dyspepsia Indian 72 hpAsia2 hspIndia
FD430i Functional dyspepsia Indian 78 hpAsia2 hspIndia
FD434i Functional dyspepsia Indian 96 hpEastAsia hspMaori
FD483i Functional dyspepsia Indian 84 hpAsia2 hspIndia
FD509i Functional dyspepsia Indian 77 hpAsia2 hspIndia
FD511i Functional dyspepsia Indian 75 hpAsia2 hspIndia
FD517i Functional dyspepsia Indian 78 hpAsia2 hspIndia
FD520i Functional dyspepsia Indian 83 hpAsia2 hspIndia
FD524i Functional dyspepsia Indian 54 hpEurope AE2
FD528i Functional dyspepsia Indian 77 hpAsia2 hspIndia
FD532i Functional dyspepsia Indian 46 hpEurope AE1
FD533i Functional dyspepsia Indian 71 hpAsia2 hspIndia
FD535i Functional dyspepsia Indian 88 hpAsia2 hspIndia
FD539i Functional dyspepsia Indian 62 hpEurope AE1
FD540i Functional dyspepsia Indian 67 hpEurope AE2
FD541i Functional dyspepsia Indian 81 hpAsia2 hspIndia
FD542i Functional dyspepsia Indian 40 hpEurope AE1
FD543i Functional dyspepsia Indian 86 hpAsia2 hspIndia
FD546i Functional dyspepsia Indian 81 hpAsia2 hspIndia
FD550i Functional dyspepsia Indian 48 hpEurope AE2
FD556i Functional dyspepsia Indian 82 hpAsia2 hspIndia
FD560i Functional dyspepsia Indian 90 hpEastAsia hspEAsia
FD563i Functional dyspepsia Indian 54 hpEurope AE2
FD572i Functional dyspepsia Indian 97 hpEastAsia hspEAsia
FD574i Functional dyspepsia Indian 82 hpAsia2 hspIndia
FD575i Functional dyspepsia Indian 86 hpAsia2 hspIndia
FD584i Functional dyspepsia Indian 85 hpAsia2 hspIndia
FD585i Functional dyspepsia Indian 71 hpAsia2 hspIndia
FD604i Functional dyspepsia Indian 88 hpAsia2 hspIndia
FD607i Functional dyspepsia Indian 84 hpAsia2 hspIndia
FD608i Functional dyspepsia Indian 83 hpAsia2 hspIndia
FD616i Functional dyspepsia Indian 50 hpEurope AE2
FD619i Functional dyspepsia Indian 79 hpAsia2 hspIndia
GC48i Functional dyspepsia Indian 95 hpEastAsia hspEAsia
FD452c Functional dyspepsia Chinese 91 hpEastAsia hspEAsia
FD493c Functional dyspepsia Chinese 63 hpEurope AE2
FD506c Functional dyspepsia Chinese 97 hpEastAsia hspEAsia
FD507c Functional dyspepsia Chinese 96 hpEastAsia hspEAsia
FD513c Functional dyspepsia Chinese 86 hpEastAsia hspEAsia
FD519c Functional dyspepsia Chinese 89 hpEastAsia hspEAsia
FD529c Functional dyspepsia Chinese 97 hpEastAsia hspEAsia
FD536c Functional dyspepsia Chinese 95 hpEastAsia hspEAsia
FD537c Functional dyspepsia Chinese 92 hpEastAsia hspEAsia
FD566c Functional dyspepsia Chinese 95 hpEastAsia hspEAsia
FD568c Functional dyspepsia Chinese 93 hpEastAsia hspEAsia
FD576c Functional dyspepsia Chinese 98 hpEastAsia hspEAsia
FD577c Functional dyspepsia Chinese 85 hpEastAsia hspEAsia
FD586c Functional dyspepsia Chinese 93 hpEastAsia hspEAsia
FD595c Functional dyspepsia Chinese 83 hpEastAsia hspEAsia
FD599c Functional dyspepsia Chinese 94 hpEastAsia hspEAsia
FD605c Functional dyspepsia Chinese 93 hpEastAsia hspEAsia
FD613c Functional dyspepsia Chinese 95 hpEastAsia hspEAsia
FD618c Functional dyspepsia Chinese 90 hpEastAsia hspEAsia
FD622c Functional dyspepsia Chinese 83 hpEastAsia hspEAsia
GC17c Gastric Cancer Chinese 89 hpEastAsia hspEAsia
GC26c Gastric Cancer Chinese 92 hpEastAsia hspEAsia
GC29c Functional dyspepsia Chinese 95 hpEastAsia hspEAsia
GC32c Gastric Cancer Chinese 89 hpEastAsia hspEAsia
GC36c Gastric Cancer Chinese 88 hpEastAsia hspEAsia
GC51c Gastric Cancer Chinese 94 hpEastAsia hspEAsia
GC52c Gastric Cancer Chinese 95 hpEastAsia hspEAsia
FD419m Functional dyspepsia Malay 56 hpEurope AE1
FD433m Functional dyspepsia Malay 57 hpEurope AE1
FD477m Functional dyspepsia Malay 73 hpAsia2 hspIndia
FD527m Functional dyspepsia Malay 88 hpEastAsia hspMaori
FD544m Functional dyspepsia Malay 59 hpEurope AE1
FD559m Functional dyspepsia Malay 69 hpAfrica1 unknown
FD589m Functional dyspepsia Malay 86 hpAsia2 hspIndia
FD662m Functional dyspepsia Malay 86 hpAsia2 hspIndia
FD703m Functional dyspepsia Malay 83 hpAsia2 hspIndia
FD710m Functional dyspepsia Malay 83 hpAsia2 hspIndia
FD711m Functional dyspepsia Malay 73 hpAsia2 hspIndia
FD719m Functional dyspepsia Malay 75 hpAsia2 hspIndia
FD725m Functional dyspepsia Malay 82 hpAsia2 hspIndia
FD728m Functional dyspepsia Malay 97 hpEastAsia hspEAsia
GC008m Functional dyspepsia Malay 53 hpEurope AE2
GC014m Gastric Cancer Malay 89 hpAsia2 hspIndia
  1. $ Denotes % genes allocated to the given population by STRUCTURE analysis