Table 2 Conserved nucleotide sequences 5' of biosynthetic operons.
Operon | Locus tag and sequence coordinates | |
|---|---|---|
| Â | G. metallireducens | G. sulfurreducens |
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase (gatCAB-mtnA-glnE-nth) | Gmet_P0076 93465..93502 | GSU3383.1 3719308..3719345 |
lysine (dapA) | Gmet_P0211 244588..244640 | GSU0157.1 176066..176117 |
aromatic amino acids (aroG-2) | Gmet_R0069 384337..384528 | GSUR082 3450692..3450963 |
cobalamin (cobUTSCB-thiC-2; cbiM-1-cbiQ-1-cbiO-1-cbiX-cobH-cbiD-cobLIM-cbiG-cobQ-cbiB-cobD) | Gmet_R0070 513498..513761 no match | GSU3011.1 3302884..3303201 GSU3004.1 3296929..3297108 |
methionine (metC-1-metC-2; metX)1 | Gmet_R0073 765279..765444 Gmet_R0129 3145553..3145656 | GSUR063 1014004..1014271 GSU2461.2 2700118..2700220 |
leucine (leuA)2 | Gmet_P1265 1425160..1425452 | GSU1906.1 2085440..2085740 |
leucine/isoleucine (leuCD) | Gmet_P1268 1428650..1428793 | GSU1903.1 2082057..2082203 |
coenzyme A (panBC) | Gmet_P1642 1843163..1843275 | GSU1704.1 1868745..1868863 |
pyrimidines (pyrRBC-carAB) | Gmet_P1768 1983157..1983191 | GSU1269.1 1384886..1384920 |
tryptophan (iorAB-paaK) | Gmet_P1827 2042198..2042288 | GSU1739.1 1905464..1905561 |
purines, pyrimidines (purMN, rimI-pyrKD) | Gmet_P1844 2056600..2056732 | GSU1757.1 1920275..1920400 |
guanine (guaBA) | Gmet_P2293 2600787..2600857 | GSU2195.1 2408782..2408854 |
serine (serA) | Gmet_P2378 2689446..2689518 | GSU1197.1 1301091..1301163 |
thiamin (thiE/D-thiC-1; thiS-1-thiG-tenI)3 | Gmet_R0131 3292750...3292897 Gmet_R0134 3319520..3319741 | GSUR060 640780..640988 GSU0589.1 622533..622801 |
arginine (argBDFG) | Gmet_P0203 3719308..3719345 | GSU0149.1 167623..167663 |