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Table 1 Proteins identified in the OMV fraction of cultures grown in M9 medium.

From: Analysis of outer membrane vesicle associated proteins isolated from the plant pathogenic bacterium Xanthomonas campestris pv. campestris

Section Protein Acc. No. MW(cal) Size range Coverage (ESI-MS/MS) Score (ESI-MS/MS) Coverage (MALDI) Score (MALDI)
1 TonB-dependent receptor with signalP AAM 42139 100858 80–150 10 162 31 134
  Outer membrane protein With signalP AAM40663 90600   6 113 27 96
  Oar putative outer membrane receptor protein, tonB-dependent with signalP AAM41771 117723   4 91 11 86
  TonB-dependent outer membrane receptor AAM41663 91909   6 49 9 89
  FpvA TonB-dependent outer membrane ferripyoverdine receptor with signalP AAM42628 81083   6 59 8 60
  HrcV (HrcV) AAM40527 69015   9 32 12 54
  HrpF (HrpF protein) AAM40515 98836   11 30 19 92
  AcrD Outer membrane efflux protein AAM41427 130193   8 27 11 102
2 FadL outer membrane fatty acid porin with signalP AAM39336 47455 60–80 13 235 - -
  Egl exported cellulase with signalP AAM42791 52209   7 140 18 88
  Avirulence protein with signalP AAM43445 67281   5 27 9 59
  HrcN HrcN protein AAM40534 47759   5 30 7 52
  ffh Signal recognition particle protein AAM40492 49312   7 27 - -
  AvrBs2 (avirulence protein) AAM39371 78471   3 27 - -
3 OmpA family outer membrane protein with signalP AAM40245 39338 40–60 27 405 21 143
  AvrBs1 avirulence protein AvrBs1 AAM41388 49789   6 29 8 61
  XynB exported xylan 1,4-beta-xylosidase with signalP AAM43196 58311   3 32 - -
  HrcU HrcU protein AAM40528 38694   6 27 6 57
4 OmpA family outer membrane protein with signalP AAM40245 39338 30–40 32 402 19 96
  VirB6 protein AAM42571 38386   6 32 5 56
  Hrc U HrcU protein AAM40528 38694   8 30 8 58
  RlpA Exported rare lipoprotein A With signalP AAM42727 46235   6 35 - -
  HrpW* (HrpW protein) AAM40517 33372   2 28 11 59
5 Putative exported protein AAM40085 35080 25–30 8 53 9 68
  OmpW3 OmpW family outer membrane protein AAM42791 23494   7 41 10 63
  *RlpB Rare lipoprotein B with signalP AAM40532 22959   10 31 - -
  Lipoprotein precursor with signalP AAM41856 26209   4 26 - -
6 OmpW3 OmpW family outer membrane protein AAM42791 23494 20–25 8 58 10 72
  HrpB4 HrpB4 protein AAM40532 22919   4 29 4 52
  HpaH Putative transglycosylase HpaH AAM40539 21109   3 29 6 58
7 Putative exported protein with signalP AAM40594 10647 15–20 15 171 22 127
  XpsH General secretion pathway protein AAM39979 18208   20 47 17 61
  UptD outer membrane protein with signalP AAM39910 17116   15 39 18 83
  HrpE HrpE protein AAM40519 9749   30 30 32 56
  1. The section indicates the gel-section excised from the corresponding SDS-PAGE. The values indicated under MW(cal) gives the calculated molecular weight of the identified proteins. The size range relates the excised gel-section with regard to the molecular weight standard on the SDS-PAGE. Score (MOWSE-score) and coverage (sequence coverage) relate to the two approaches (ESI-MS/MS or MALDI-TOF-MS) utilized for the identification of the proteins on the SDS-PAGE.