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Table 4 Genotyping of C. psittaci field strains using the AT microarray and comparison with PCR-RFLP and ompA sequencing

From: Genotyping of Chlamydophila psittaci using a new DNA microarray assay based on sequence analysis of ompA genes

Strain ID Origin Genotype identification by
   PCR-RFLP ompA sequencing ArrayTube genotyping*
C1/97 sheep, Germany, 1997 C C C
C5/98 calf, Germany, 1998 A A A-6BC
C19/98 sheep, Germany, 1998 A A A-6BC
DC15 cattle, Germany, 2001 A A A-6BC
DC28 amazon parrot, Germany, 2001 A A A-VS1
DC29 amazon parrot, Germany, 2001 A A A-6BC
DC32 pigeon, Germany, 2001 B B B
Cal-10 ferret, USA, 1936 E E E
St04 chicken, Germany, 2005 A A A-VS1
St05 duck, Germany, 2005 E E/B EB-E30
St06 duck, Germany, 2005 A A A-VS1
St07 duck, Germany, 2005 E E/B EB-E30
  1. * AT hybridization signal pattern assigned according to Table 3
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