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Table 4 Amount of phylotypes in clone libraries from different samples and annotation result from Genbank.

From: Universal ligation-detection-reaction microarray applied for compost microbes

Phylotype

Phylogroup

Closest Genbank match

Reactor

NK06

day 8

Reactor

NK07

day 16

Reactor

NK09

day 3

Reactor

NK10

day 8

IVAR1

NK12

1 mo.

IVAR1

NK14a

1 mo.

IVAR1

NK14b

1 mo.

YTV1

NK19

day 21

FM177664

Basidiomycetes

Mrakia sp.

   

1

    

FM177671

Basidiomycetes

Coprinopsis cinerea

    

1

   

FM177679

Candida

Candida rugosa

    

9

   

FM177672

Candida

Candida rugosa

    

1

   

FM177678

Dipodascaceae

Dipodascus australiensis

    

1

   

FM177644

Group1

Uncultured soil fungus

1

       

FM177645

Group1

Uncultured eukaryote

1

       

FM177646

Group1

Uncultured eukaryote

1

       

FM177647

Group1

Uncultured eukaryote

1

       

FM177648

Group1

Uncultured eukaryote

2

       

FM177650

Group1

Uncultured eukaryote

1

       

FM177649

Group1

Uncultured eukaryote

1

       

FM177653

Group1

Uncultured eukaryote

1

2

 

4

    

FM177665

Group1

Uncultured eukaryote

2

  

8

    

FM177668

Group1

Uncultured eukaryote

23

  

6

    

FM177670

Group1

Uncultured eukaryote

6

  

1

    

FM177666

Group1

Uncultured eukaryote

9

11

 

4

    

FM177667

Group1

Uncultured eukaryote

   

6

    

FM177669

Group1

Uncultured eukaryote

19

  

49

    

FM177651

Pezizomycotina

Cephalotheca foveolata

 

1

      

FM177696

Pezizomycotina

Penicillium radicum

  

1

     

FM177677

Pezizomycotina

Thermomyces lanuginosus

    

25

61

51

71

FM177676

Pezizomycotina

Trichocomaceae sp.

    

1

14

18

 

FM177684

Pezizomycotina

Thermomyces lanuginosus

    

3

3

  

FM177685

Pezizomycotina

Uncultured soil fungus

     

1

  

FM177688

Pezizomycotina

Aspergillus oryzae

    

1

1

3

 

FM177689

Pezizomycotina

Thermomyces lanuginosus

     

1

  

FM177691

Pezizomycotina

Thermomyces lanuginosus

      

1

 

FM177695

Pezizomycotina

Thermomyces lanuginosus

       

2

FM177662

Saccharomycetales 1

Issatchenkia orientalis

1

2

1

3

8

1

12

 

FM177654

Saccharomycetales 1

Saccharomycetales sp.

  

1

     

FM177663

Saccharomycetales 1

Saccharomycetales sp.

  

1

     

FM177655

Saccharomycetales 1

Saccharomycetaceae sp.

  

2

     

FM177656

Saccharomycetales 1

Saccharomycetales sp.

  

1

     

FM177661

Saccharomycetales 1

Issatchenkia orientalis

  

69

     

FM177673

Saccharomycetales 1

Uncultured eukaryote

    

1

   

FM177680

Saccharomycetales 1

Saccharomycetales sp.

  

7

 

1

   

FM177652

Saccharomycetales 2

Candida sake

 

1

      

FM177658

Saccharomycetales 2

Kluyveromyces marxianus

  

1

1

    

FM177659

Saccharomycetales 2

S. cerevisiae

  

2

     

FM177660

Saccharomycetales 2

S. cerevisiae

  

4

     

FM177675

Saccharomycetales 2

Torulaspora delbrueckii

    

1

   

FM177681

Saccharomycetales 2

Saccharomycetales sp.

    

2

   

FM177690

Saccharomycetales 2

Saccharomycetales sp.

     

1

  

FM177657

Zygomycetes

Mucor sp

  

1

     

FM177674

Zygomycetes

Absidia corymbifera

    

8

11

1

 

FM177682

Zygomycetes

Mucor racemosus

    

1

   

FM177683

Zygomycetes

Absidia corymbifera

    

1

   

FM177687

Zygomycetes

Absidia corymbifera

     

2

  

FM177686

Zygomycetes

Absidia corymbifera

    

2

1

  

FM177692

Zygomycetes

Absidia sp.

      

1

 

FM177694

Zygomycetes

Absidia corymbifera

      

1

 

FM177693

Zygomycetes

Rhizomucor miehei

    

2

 

1

 
  1. The phylotypes are marked with the EMBL nucleotide sequence accession number.
  2. 1 IVAR and YTV were from full-scale facilities