TY - JOUR AU - Marsh, P. D. PY - 2005 DA - 2005// TI - Dental plaque: biological significance of a biofilm and community life-style JO - J Clin Periodontol VL - 32 UR - https://doi.org/10.1111/j.1600-051X.2005.00790.x DO - 10.1111/j.1600-051X.2005.00790.x ID - Marsh2005 ER - TY - JOUR AU - Hall-Stoodley, L. AU - Costerton, J. W. AU - Stoodley, P. PY - 2004 DA - 2004// TI - Bacterial biofilms: from the natural environment to infectious diseases JO - Nat Rev Microbiol VL - 2 UR - https://doi.org/10.1038/nrmicro821 DO - 10.1038/nrmicro821 ID - Hall-Stoodley2004 ER - TY - JOUR AU - Stewart, P. S. AU - Costerton, J. W. PY - 2001 DA - 2001// TI - Antibiotic resistance of bacteria in biofilms JO - Lancet VL - 358 UR - https://doi.org/10.1016/S0140-6736(01)05321-1 DO - 10.1016/S0140-6736(01)05321-1 ID - Stewart2001 ER - TY - JOUR AU - Marsh, P. D. PY - 2003 DA - 2003// TI - Are dental diseases examples of ecological catastrophes? JO - Microbiology VL - 149 UR - https://doi.org/10.1099/mic.0.26082-0 DO - 10.1099/mic.0.26082-0 ID - Marsh2003 ER - TY - JOUR AU - Wilson, M. PY - 2001 DA - 2001// TI - Bacterial biofilms and human disease JO - Sci Prog VL - 84 UR - https://doi.org/10.3184/003685001783238998 DO - 10.3184/003685001783238998 ID - Wilson2001 ER - TY - JOUR AU - Kuramitsu, H. K. PY - 1993 DA - 1993// TI - Virulence factors of mutans streptococci: role of molecular genetics JO - Crit Rev Oral Biol Med VL - 4 ID - Kuramitsu1993 ER - TY - JOUR AU - Bowen, W. H. PY - 2002 DA - 2002// TI - Do we need to be concerned about dental caries in the coming millennium? JO - Crit Rev Oral Biol Med VL - 13 UR - https://doi.org/10.1177/154411130201300203 DO - 10.1177/154411130201300203 ID - Bowen2002 ER - TY - JOUR AU - Liljemark, W. F. AU - Bloomquist, C. PY - 1996 DA - 1996// TI - Human oral microbial ecology and dental caries and periodontal diseases JO - Crit Rev Oral Biol Med VL - 7 UR - https://doi.org/10.1177/10454411960070020601 DO - 10.1177/10454411960070020601 ID - Liljemark1996 ER - TY - CHAP AU - Steinberg, D. ED - An, Y. H. ED - Friedman, R. J. PY - 2000 DA - 2000// TI - Studying plaque biofilms on various dental surfaces BT - Handbook of Bacterial Adhesion: Principles, Methods, and Applications PB - Humana Press CY - Totowa UR - https://doi.org/10.1385/1-59259-224-4:353 DO - 10.1385/1-59259-224-4:353 ID - Steinberg2000 ER - TY - JOUR AU - Ten Cate, J. M. PY - 2006 DA - 2006// TI - Biofilms, a new approach to the microbiology of dental plaque JO - Odontology VL - 94 UR - https://doi.org/10.1007/s10266-006-0063-3 DO - 10.1007/s10266-006-0063-3 ID - Ten Cate2006 ER - TY - JOUR AU - Gilmore, K. S. AU - Srinivas, P. AU - Akins, D. R. AU - Hatter, K. L. AU - Gilmore, M. S. PY - 2003 DA - 2003// TI - Growth, development, and gene expression in a persistent Streptococcus gordonii biofilm JO - Infect Immun VL - 71 UR - https://doi.org/10.1128/IAI.71.8.4759-4766.2003 DO - 10.1128/IAI.71.8.4759-4766.2003 ID - Gilmore2003 ER - TY - JOUR AU - Sauer, K. AU - Camper, A. K. AU - Ehrlich, G. D. AU - Costerton, J. W. AU - Davies, D. G. PY - 2002 DA - 2002// TI - Pseudomonas aeruginosa displays multiple phenotypes during development as a biofilm JO - J Bacteriol VL - 184 UR - https://doi.org/10.1128/jb.184.4.1140-1154.2002 DO - 10.1128/jb.184.4.1140-1154.2002 ID - Sauer2002 ER - TY - JOUR AU - Whiteley, M. AU - Bangera, M. G. AU - Bumgarner, R. E. AU - Parsek, M. R. AU - Teitzel, G. M. AU - Lory, S. AU - Greenberg, E. P. PY - 2001 DA - 2001// TI - Gene expression in Pseudomonas aeruginosa biofilms JO - Nature VL - 413 UR - https://doi.org/10.1038/35101627 DO - 10.1038/35101627 ID - Whiteley2001 ER - TY - JOUR AU - Shemesh, M. AU - Tam, A. AU - Steinberg, D. PY - 2007 DA - 2007// TI - Differential gene expression profiling of Streptococcus mutans cultured under biofilm and planktonic conditions JO - Microbiology VL - 153 UR - https://doi.org/10.1099/mic.0.2006/002030-0 DO - 10.1099/mic.0.2006/002030-0 ID - Shemesh2007 ER - TY - JOUR AU - Bowden, G. H. AU - Li, Y. H. PY - 1997 DA - 1997// TI - Nutritional influences on biofilm development JO - Adv Dent Res VL - 11 UR - https://doi.org/10.1177/08959374970110012101 DO - 10.1177/08959374970110012101 ID - Bowden1997 ER - TY - JOUR AU - Bowden, G. H. AU - Hamilton, I. R. PY - 1998 DA - 1998// TI - Survival of oral bacteria JO - Crit Rev Oral Biol Med VL - 9 UR - https://doi.org/10.1177/10454411980090010401 DO - 10.1177/10454411980090010401 ID - Bowden1998 ER - TY - JOUR AU - Rozen, R. AU - Bachrach, G. AU - Bronshteyn, M. AU - Gedalia, I. AU - Steinberg, D. PY - 2001 DA - 2001// TI - The role of fructans on dental biofilm formation by Streptococcus sobrinus, Streptococcus mutans, Streptococcus gordonii and Actinomyces viscosus JO - FEMS Microbiol Lett VL - 195 UR - https://doi.org/10.1111/j.1574-6968.2001.tb10522.x DO - 10.1111/j.1574-6968.2001.tb10522.x ID - Rozen2001 ER - TY - JOUR AU - Bayles, K. W. PY - 2007 DA - 2007// TI - The biological role of death and lysis in biofilm development JO - Nat Rev Microbiol VL - 5 UR - https://doi.org/10.1038/nrmicro1743 DO - 10.1038/nrmicro1743 ID - Bayles2007 ER - TY - JOUR AU - Balaban, N. Q. AU - Merrin, J. AU - Chait, R. AU - Kowalik, L. AU - Leibler, S. PY - 2004 DA - 2004// TI - Bacterial persistence as a phenotypic switch JO - Science VL - 305 UR - https://doi.org/10.1126/science.1099390 DO - 10.1126/science.1099390 ID - Balaban2004 ER - TY - JOUR AU - Lewis, K. PY - 2007 DA - 2007// TI - Persister cells, dormancy and infectious disease JO - Nat Rev Microbiol VL - 5 UR - https://doi.org/10.1038/nrmicro1557 DO - 10.1038/nrmicro1557 ID - Lewis2007 ER - TY - JOUR AU - Kearns, D. B. PY - 2008 DA - 2008// TI - Division of labour during Bacillus subtilis biofilm formation JO - Mol Microbiol VL - 67 UR - https://doi.org/10.1111/j.1365-2958.2007.06053.x DO - 10.1111/j.1365-2958.2007.06053.x ID - Kearns2008 ER - TY - JOUR AU - Kearns, D. B. AU - Losick, R. PY - 2005 DA - 2005// TI - Cell population heterogeneity during growth of Bacillus subtilis JO - Genes Dev VL - 19 UR - https://doi.org/10.1101/gad.1373905 DO - 10.1101/gad.1373905 ID - Kearns2005 ER - TY - JOUR AU - Dubnau, D. AU - Losick, R. PY - 2006 DA - 2006// TI - Bistability in bacteria JO - Mol Microbiol VL - 61 UR - https://doi.org/10.1111/j.1365-2958.2006.05249.x DO - 10.1111/j.1365-2958.2006.05249.x ID - Dubnau2006 ER - TY - JOUR AU - Chai, Y. AU - Chu, F. AU - Kolter, R. AU - Losick, R. PY - 2008 DA - 2008// TI - Bistability and biofilm formation in Bacillus subtilis JO - Mol Microbiol VL - 67 UR - https://doi.org/10.1111/j.1365-2958.2007.06040.x DO - 10.1111/j.1365-2958.2007.06040.x ID - Chai2008 ER - TY - JOUR AU - Lonnstedt, I. AU - Speed, T. PY - 2002 DA - 2002// TI - Replicated microarray data JO - Statistica Sinica VL - 12 ID - Lonnstedt2002 ER - TY - JOUR AU - Russell, M. W. AU - Harrington, D. J. AU - Russell, R. R. PY - 1995 DA - 1995// TI - Identity of Streptococcus mutans surface protein antigen III and wall-associated protein antigen A JO - Infect Immun VL - 63 ID - Russell1995 ER - TY - JOUR AU - Levesque, C. M. AU - Voronejskaia, E. AU - Huang, Y. C. AU - Mair, R. W. AU - Ellen, R. P. AU - Cvitkovitch, D. G. PY - 2005 DA - 2005// TI - Involvement of sortase anchoring of cell wall proteins in biofilm formation by Streptococcus mutans JO - Infect Immun VL - 73 UR - https://doi.org/10.1128/IAI.73.6.3773-3777.2005 DO - 10.1128/IAI.73.6.3773-3777.2005 ID - Levesque2005 ER - TY - JOUR AU - Qian, H. AU - Dao, M. L. PY - 1993 DA - 1993// TI - Inactivation of the Streptococcus mutans wall-associated protein A gene (wapA) results in a decrease in sucrose-dependent adherence and aggregation JO - Infect Immun VL - 61 ID - Qian1993 ER - TY - JOUR AU - Zhu, L. AU - Kreth, J. AU - Cross, S. E. AU - Gimzewski, J. K. AU - Shi, W. AU - Qi, F. PY - 2006 DA - 2006// TI - Functional characterization of cell-wall-associated protein WapA in Streptococcus mutans JO - Microbiology VL - 152 UR - https://doi.org/10.1099/mic.0.28883-0 DO - 10.1099/mic.0.28883-0 ID - Zhu2006 ER - TY - JOUR AU - Hasona, A. AU - Crowley, P. J. AU - Levesque, C. M. AU - Mair, R. W. AU - Cvitkovitch, D. G. AU - Bleiweis, A. S. AU - Brady, L. J. PY - 2005 DA - 2005// TI - Streptococcal viability and diminished stress tolerance in mutants lacking the signal recognition particle pathway or YidC2 JO - Proc Natl Acad Sci USA VL - 102 UR - https://doi.org/10.1073/pnas.0508778102 DO - 10.1073/pnas.0508778102 ID - Hasona2005 ER - TY - JOUR AU - Keenan, R. J. AU - Freymann, D. M. AU - Stroud, R. M. AU - Walter, P. PY - 2001 DA - 2001// TI - The signal recognition particle JO - Annu Rev Biochem VL - 70 UR - https://doi.org/10.1146/annurev.biochem.70.1.755 DO - 10.1146/annurev.biochem.70.1.755 ID - Keenan2001 ER - TY - JOUR AU - Herskovits, A. A. AU - Bochkareva, E. S. AU - Bibi, E. PY - 2000 DA - 2000// TI - New prospects in studying the bacterial signal recognition particle pathway JO - Mol Microbiol VL - 38 UR - https://doi.org/10.1046/j.1365-2958.2000.02198.x DO - 10.1046/j.1365-2958.2000.02198.x ID - Herskovits2000 ER - TY - JOUR AU - Simionato, M. R. AU - Tucker, C. M. AU - Kuboniwa, M. AU - Lamont, G. AU - Demuth, D. R. AU - Tribble, G. D. AU - Lamont, R. J. PY - 2006 DA - 2006// TI - Porphyromonas gingivalis genes involved in community development with Streptococcus gordonii JO - Infect Immun VL - 74 UR - https://doi.org/10.1128/IAI.00639-06 DO - 10.1128/IAI.00639-06 ID - Simionato2006 ER - TY - JOUR AU - Burne, R. A. AU - Chen, Y. Y. AU - Penders, J. E. PY - 1997 DA - 1997// TI - Analysis of gene expression in Streptococcus mutans in biofilms in vitro JO - Adv Dent Res VL - 11 UR - https://doi.org/10.1177/08959374970110010101 DO - 10.1177/08959374970110010101 ID - Burne1997 ER - TY - JOUR AU - Shemesh, M. AU - Tam, A. AU - Steinberg, D. PY - 2007 DA - 2007// TI - Expression of biofilm-associated genes of Streptococcus mutans in response to glucose and sucrose JO - J Med Microbiol VL - 56 UR - https://doi.org/10.1099/jmm.0.47146-0 DO - 10.1099/jmm.0.47146-0 ID - Shemesh2007 ER - TY - JOUR AU - Shemesh, M. AU - Tam, A. AU - Feldman, M. AU - Steinberg, D. PY - 2006 DA - 2006// TI - Differential expression profiles of Streptococcus mutans ftf, gtf and vicR genes in the presence of dietary carbohydrates at early and late exponential growth phases JO - Carbohydr Res VL - 341 UR - https://doi.org/10.1016/j.carres.2006.05.010 DO - 10.1016/j.carres.2006.05.010 ID - Shemesh2006 ER - TY - JOUR AU - Wang, B. AU - Kuramitsu, H. K. PY - 2006 DA - 2006// TI - A pleiotropic regulator, Frp, affects exopolysaccharide synthesis, biofilm formation, and competence development in Streptococcus mutans JO - Infect Immun VL - 74 UR - https://doi.org/10.1128/IAI.00001-06 DO - 10.1128/IAI.00001-06 ID - Wang2006 ER - TY - JOUR AU - Kolenbrander, P. E. PY - 2000 DA - 2000// TI - Oral microbial communities: biofilms, interactions, and genetic systems JO - Annu Rev Microbiol VL - 54 UR - https://doi.org/10.1146/annurev.micro.54.1.413 DO - 10.1146/annurev.micro.54.1.413 ID - Kolenbrander2000 ER - TY - JOUR AU - Kolenbrander, P. E. AU - Andersen, R. N. AU - Blehert, D. S. AU - Egland, P. G. AU - Foster, J. S. AU - Palmer, R. J. PY - 2002 DA - 2002// TI - Communication among oral bacteria JO - Microbiol Mol Biol Rev VL - 66 UR - https://doi.org/10.1128/MMBR.66.3.486-505.2002 DO - 10.1128/MMBR.66.3.486-505.2002 ID - Kolenbrander2002 ER - TY - JOUR AU - Hardie, K. R. AU - Heurlier, K. PY - 2008 DA - 2008// TI - Establishing bacterial communities by 'word of mouth': LuxS and autoinducer 2 in biofilm development JO - Nat Rev Microbiol VL - 6 UR - https://doi.org/10.1038/nrmicro1916 DO - 10.1038/nrmicro1916 ID - Hardie2008 ER - TY - JOUR AU - Maeda, K. AU - Tribble, G. D. AU - Tucker, C. M. AU - Anaya, C. AU - Shizukuishi, S. AU - Lewis, J. P. AU - Demuth, D. R. AU - Lamont, R. J. PY - 2008 DA - 2008// TI - A Porphyromonas gingivalis Tyrosine Phosphatase is a Multifunctional Regulator of Virulence Attributes JO - Mol Microbiol VL - 69 UR - https://doi.org/10.1111/j.1365-2958.2008.06338.x DO - 10.1111/j.1365-2958.2008.06338.x ID - Maeda2008 ER - TY - JOUR AU - Fuqua, C. AU - Greenberg, E. P. PY - 2002 DA - 2002// TI - Listening in on bacteria: acyl-homoserine lactone signalling JO - Nat Rev Mol Cell Biol VL - 3 UR - https://doi.org/10.1038/nrm907 DO - 10.1038/nrm907 ID - Fuqua2002 ER - TY - JOUR AU - Whitehead, N. A. AU - Barnard, A. M. AU - Slater, H. AU - Simpson, N. J. AU - Salmond, G. P. PY - 2001 DA - 2001// TI - Quorum-sensing in Gram-negative bacteria JO - FEMS Microbiol Rev VL - 25 UR - https://doi.org/10.1111/j.1574-6976.2001.tb00583.x DO - 10.1111/j.1574-6976.2001.tb00583.x ID - Whitehead2001 ER - TY - JOUR AU - Federle, M. J. AU - Bassler, B. L. PY - 2003 DA - 2003// TI - Interspecies communication in bacteria JO - J Clin Invest VL - 112 UR - https://doi.org/10.1172/JCI20195 DO - 10.1172/JCI20195 ID - Federle2003 ER - TY - JOUR AU - Winzer, K. AU - Hardie, K. R. AU - Williams, P. PY - 2003 DA - 2003// TI - LuxS and autoinducer-2: their contribution to quorum sensing and metabolism in bacteria JO - Adv Appl Microbiol VL - 53 UR - https://doi.org/10.1016/S0065-2164(03)53009-X DO - 10.1016/S0065-2164(03)53009-X ID - Winzer2003 ER - TY - JOUR AU - Merritt, J. AU - Kreth, J. AU - Shi, W. AU - Qi, F. PY - 2005 DA - 2005// TI - LuxS controls bacteriocin production in Streptococcus mutans through a novel regulatory component JO - Mol Microbiol VL - 57 UR - https://doi.org/10.1111/j.1365-2958.2005.04733.x DO - 10.1111/j.1365-2958.2005.04733.x ID - Merritt2005 ER - TY - JOUR AU - Jefferson, K. K. PY - 2004 DA - 2004// TI - What drives bacteria to produce a biofilm? JO - FEMS Microbiol Lett VL - 236 UR - https://doi.org/10.1111/j.1574-6968.2004.tb09643.x DO - 10.1111/j.1574-6968.2004.tb09643.x ID - Jefferson2004 ER - TY - JOUR AU - Bassler, B. L. AU - Losick, R. PY - 2006 DA - 2006// TI - Bacterially speaking JO - Cell VL - 125 UR - https://doi.org/10.1016/j.cell.2006.04.001 DO - 10.1016/j.cell.2006.04.001 ID - Bassler2006 ER - TY - JOUR AU - Henke, J. M. AU - Bassler, B. L. PY - 2004 DA - 2004// TI - Three parallel quorum-sensing systems regulate gene expression in Vibrio harveyi JO - J Bacteriol VL - 186 UR - https://doi.org/10.1128/JB.186.20.6902-6914.2004 DO - 10.1128/JB.186.20.6902-6914.2004 ID - Henke2004 ER - TY - JOUR AU - Sela, S. AU - Frank, S. AU - Belausov, E. AU - Pinto, R. PY - 2006 DA - 2006// TI - A Mutation in the luxS gene influences Listeria monocytogenes biofilm formation JO - Appl Environ Microbiol VL - 72 UR - https://doi.org/10.1128/AEM.00048-06 DO - 10.1128/AEM.00048-06 ID - Sela2006 ER - TY - JOUR AU - Lemos, J. A. AU - Brown, T. A. AU - Burne, R. A. PY - 2004 DA - 2004// TI - Effects of RelA on key virulence properties of planktonic and biofilm populations of Streptococcus mutans JO - Infect Immun VL - 72 UR - https://doi.org/10.1128/IAI.72.3.1431-1440.2004 DO - 10.1128/IAI.72.3.1431-1440.2004 ID - Lemos2004 ER - TY - JOUR AU - Wen, Z. T. AU - Burne, R. A. PY - 2004 DA - 2004// TI - LuxS-mediated signaling in Streptococcus mutans is involved in regulation of acid and oxidative stress tolerance and biofilm formation JO - J Bacteriol VL - 186 UR - https://doi.org/10.1128/JB.186.9.2682-2691.2004 DO - 10.1128/JB.186.9.2682-2691.2004 ID - Wen2004 ER - TY - JOUR AU - Yoshida, A. AU - Ansai, T. AU - Takehara, T. AU - Kuramitsu, H. K. PY - 2005 DA - 2005// TI - LuxS-based signaling affects Streptococcus mutans biofilm formation JO - Appl Environ Microbiol VL - 71 UR - https://doi.org/10.1128/AEM.71.5.2372-2380.2005 DO - 10.1128/AEM.71.5.2372-2380.2005 ID - Yoshida2005 ER - TY - JOUR AU - Wen, Z. T. AU - Burne, R. A. PY - 2002 DA - 2002// TI - Functional genomics approach to identifying genes required for biofilm development by Streptococcus mutans JO - Appl Environ Microbiol VL - 68 UR - https://doi.org/10.1128/AEM.68.3.1196-1203.2002 DO - 10.1128/AEM.68.3.1196-1203.2002 ID - Wen2002 ER - TY - JOUR AU - Pratten, J. AU - Wilson, M. PY - 1999 DA - 1999// TI - Antimicrobial susceptibility and composition of microcosm dental plaques supplemented with sucrose JO - Antimicrob Agents Chemother VL - 43 ID - Pratten1999 ER - TY - JOUR AU - Paramonova, E. AU - de Jong, E. D. AU - Krom, B. P. AU - Mei, H. C. v. a. n. d. e. r. AU - Busscher, H. J. AU - Sharma, P. K. PY - 2007 DA - 2007// TI - Low-load compression testing: a novel way of measuring biofilm thickness JO - Appl Environ Microbiol VL - 73 UR - https://doi.org/10.1128/AEM.00935-07 DO - 10.1128/AEM.00935-07 ID - Paramonova2007 ER - TY - JOUR AU - Smyth, G. K. PY - 2004 DA - 2004// TI - Linear models and empirical bayes methods for assessing differential expression in microarray experiments JO - Stat Appl Genet Mol Biol VL - 3 ID - Smyth2004 ER - TY - JOUR AU - Smyth, G. K. AU - Speed, T. PY - 2003 DA - 2003// TI - Normalization of cDNA microarray data JO - Methods VL - 31 UR - https://doi.org/10.1016/S1046-2023(03)00155-5 DO - 10.1016/S1046-2023(03)00155-5 ID - Smyth2003 ER - TY - JOUR AU - Reiner, A. AU - Yekutieli, D. AU - Benjamini, Y. PY - 2003 DA - 2003// TI - Identifying differentially expressed genes using false discovery rate controlling procedures JO - Bioinformatics VL - 19 UR - https://doi.org/10.1093/bioinformatics/btf877 DO - 10.1093/bioinformatics/btf877 ID - Reiner2003 ER - TY - JOUR AU - Smyth, G. K. AU - Michaud, J. AU - Scott, H. S. PY - 2005 DA - 2005// TI - Use of within-array replicate spots for assessing differential expression in microarray experiments JO - Bioinformatics VL - 21 UR - https://doi.org/10.1093/bioinformatics/bti270 DO - 10.1093/bioinformatics/bti270 ID - Smyth2005 ER -