Skip to main content

Table 1 Percentage identities determination between the OmcB proteins, the Nt and Ct regions within the chlamydial species.

From: Evaluation of an in silico predicted specific and immunogenic antigen from the OmcB protein for the serodiagnosis of Chlamydia trachomatis infections

Chlamydial species

Serovars

Protein accession numbers

OmcB protein

Nt region

Ct region

C. trachomatis

A

REFSEQ: YP_328263

97.5% (539/553)

18.3% (101/553)

7.2% (40/553)

 

B

EMBL: CAA37588

98.5% (539/547)

18.5% (101/547)

7.3% (40/547)

 

C

GenBank: AAA23159

98.7% (540/547)

18.5% (101/547)

7.3% (40/547)

 

D

REFSEQ: NP_219955

97.5% (539/553)

18.3% (101/553)

7.2% (40/553)

 

E

EMBL: CAA39396

100% (547/547)

19.0% (104/547)

7.3% (40/547)

 

F

GenBank: AAA23154

99.1% (542/547)

18.6% (102/547)

7.3% (40/547)

 

G/H/K

Swiss-Prot: Q548P6

98.5% (539/547)

18.5% (101/547)

7.3% (40/547)

 

I/J

Swiss-Prot: Q933I7

98.5% (539/547)

18.5% (101/547)

7.3% (40/547)

 

L1/L2/L3

Swiss-Prot: P21354

97.8% (535/547)

18.3% (100/547)

7.3% (40/547)

C. pneumoniae

 

EMBL: CAA37590

71.5% (398/557)

8.8% (49/557)

4.3% (24/556)

C. psittaci

 

EMBL: CAA37592

70.9% (397/560)

8.2% (46/560)

4.7% (26/557)

  1. Nt: N-terminal, Ct: C-terminal, Percentage identities were determined using the Needle program. C. trachomatis serovar E was used as the reference sequence for all alignments performed.