From: PCR-based rapid genotyping of Stenotrophomonas maltophiliaisolates
locus | coordinates | PCR primers | Ta |
---|---|---|---|
I | 0078153–0078502 | f [0077906] CACCGCCGAGTGCGATGCCGATCTT | 69°C |
r [0078751] ACCCGACCGTGGACATGGACGTGCG | |||
II | 0458218–0458270 | f [0458122] GACGTGAAGTGGCTGCGCCTGAAGC | 65°C |
r [0458343] CGTTCCAGCCACTGTACCGCCACCA | |||
III | 0898001–0898182 | f [0897802] GTGGTGGTGATCAAGCGCGGCAAGG | 68°C |
r [0898549] GGCAGGTCGGCTGGATGGCGGTACT | |||
IV | 1260576–1260695 | f [1260393] CAGGAACGATGTGCGGGCAGTGACC | 66°C |
r [1260806] CTGTCCGAAACACATGGCGTGGCAG | |||
V | 1397805–1398345 | f [1397652] TGATCGGCATCATCGTGGTCGGTAC | 65°C |
r [1398470] GCGAGTACCTGAGCGAACTGGGGTG | |||
VI | 2363422–2363811 | f [2363314] CAGCATCATCAACAAGCACCATGGC | 65°C |
r [2363972] TATCGCTTCCTGACCAAACCGTGGA | |||
VII | 2877734–2877879 | f [2877624] GCCGCTGGTCTGGCCGTTGATGATG | 65°C |
r [2877987] GCTGGAGCTGCACCTGAGCGCCTGG | |||
VIII | 2893713–2894397 | f [2893497] TGGACCGCCACCGACTACCTGATGG | 67°C |
r [2894486] CACCACCACCACCGAGGTCTACCCG | |||
IX | 3626782–3627370 | f [3626652] CGAGTACTTCACCCCGGTCAACGAG | 65°C |
r [3627448] AGGGCCAGACCTTCGAGGAATTCAA | |||
X | 3842432–3842620 | f [3842338] TGGTGGTCAATGATGGGCAGCCGGA | 66°C |
r [3842731] CCGCCACGATGACTGGTCTCAGCCG | |||
XI | 4475729–4476245 | f [4475549] CACAGGTCACACAGCGTGGTGTACG | 65°C |
r [4476369] GGTTGTTCGGCATCGGTTTGATCAT | |||
XII | 4528877–4529176 | f [4528752] CGCCATCCAGCCGTCCTGTACTGCT | 66°C |
r [4529342] GGCGGGTTGGGTGGGTACTACCTGG |