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Table 1 Composition of the panel and results of the pre-release testing and of the study

From: External quality assessment of cytomegalovirus DNA detection on dried blood spots

     

Correct qualitative results

     

PCR

  

Pre-release testing: qualitative results on DBS

Conventional

Real-time

Total results

n = 33

n(%)

SAMPLE

Target sample concentration (copies/ml)

MI1

UT12

UT22

In-house n = 5 n (%)

Commercial n = 5 n (%)

In-house n = 23 n (%)

 

A

3.9 × 106

+

+

+

5 (100.0)

5 (100.0)

23 (100.0)

33 (100.0)

B

9.6 × 105

+

+

+

5 (100.0)

5 (100.0)

22 (95.7)

32 (97.0)

C

8.8 × 104

+

+

+

5 (100.0)

5 (100.0)

20 (87.0)

30 (90.9)

D

9.4 × 103

+

+

+

5 (100.0)

5 (100.0)

10 (43.5)

20 (60.6)

E

9.4 × 103

+

-

+

5 (100.0)

5 (100.0)

9 (39.1)

19 (57.6)

F

7.3 × 102

-

-

+

2 (40.0)

2 (40.0)

2 (8.7)

6 (18.2)

G

7.3 × 102

-

-

-

0 (0.0)

1 (20.0)

1 (4.3)

2 (6.1)

H

negative

-

-

-

4 (80.0)

5 (100.0)

22 (95.7)

31 (93.9)

I

negative

-

-

-

4 (80.0)

4 (80.0)

22 (95.7)

30 (90.9)

  1. 1 Nested PCR in-house on the Applied Biosystems (ABI) GeneAmp PCR System 9700. Sample pre-treatment: thermal shock (Binda et al 2004). Analysis of one punch (3 mm) in triplicate.
  2. 2 Real-time in house PCR on the Applied Biosystems (ABI) ABI PRISM 7900 Sequence Detection System. Sample pre-treatment: QIAGEN DSP kit. UT1: Analysis of three punches (3 mm each), UT2: Analysis of the entire dried blood spot.