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Table 3 PCR amplification conditions used in the present study.

From: Concurrent genotyping of Helicobacter pylorivirulence genes and human cytokine SNP sites using whole genome amplified DNA derived from minute amounts of gastric biopsy specimen DNA

PCR No

Initial denaturation

Denaturation

Annealing

Extension

No of cycles

Final extension

1

95°C; 15 min

95°C; 30 s

56°C; 30 s

72°C; 1 min

30

72°C; 10 min

2

95°C; 15 min

95°C; 30 s

62°C; 30 s

72°C; 1 min

30

72°C; 10 min

3

95°C; 15 min

95°C; 30 s

55°C; 30 s

72°C; 1 min

30

72°C; 10 min

4

95°C; 15 min

95°C; 30 s

57°C; 30 s

72°C; 1 min

37

72°C; 10 min

5

95°C; 15 min

95°C; 30 s

65°C, 30 s

72°C; 30 s

5

72°C; 10 min

  

95°C; 30 s

60°C; 30 s

72°C; 30 s

25

 
  

95°C; 30 s

55°C; 30 s

72°C; 30 s

5