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Table 1 Details of Lxc-IS elements.

From: Characterization of new IS elements and studies of their dispersion in two subspecies of Leifsonia xyli

Lxc-IS IS length (bp) Tpase length (aa)a IRs DR (host sequence) Minimal no of copies IS familyb Most related Lxx-IS
IS1237 899/798 218 5' GAGGTGGTTTCAGTAGTCG 3' GAGATGGTTTCAGTAGTCGc TTA (TAA) 26 IS5 ISLxx6
ISLxc1 2631 262 (istB) 5' TGTCTGTGTCACTGTTAGCGGGCTCCG GGTTGTCGGAGTTGTCTGGCCCCGGCG 3' TGACTATGTCAAGGCTGGCGGGGACCG GGTTGTCGAAGTTAGTTGGCCCCAGCG fATCGCC 2 IS21 ISLxx3
ISLxc2 1105 332 5' TGTGTTTCTCAGGGACGTTGGT 3' TGTGCTGCTCAGGGACGTTGGT NCTAGN 16 IS481 ISLxx4
ISLxc3 1511 351 5' CTTGGGTTCTAACGGTCGTTGCAACA 3' GGCGGATTCTAGTGGTCGTTGCAACA - 8 IS30 ISLxx5
ISLxc4 1311/896 380 5' GGGTGGGTTCTAACAGTGGTCGCAACAC 3' GGGTGGGTTCTAACAGTGGTCGCAACAC - 5 IS30 ISLxx5
  1. N – not complementary nucleotides
  2. a – assuming predicted features for regulation of transposition at translational level are overcome.
  3. b – according to Chandler & Mahillon family classification [11].
  4. c – three IS1237 copies have a G instead of A in the 3' IR, making perfectly complementary IRs.