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Table 1 S. Typhimurium mutants that exhibited different type 1 fimbrial phenotypes than the parental strain

From: Identification of the genetic determinants of Salmonella enterica serotype Typhimurium that may regulate the expression of the type 1 fimbriae in response to solid agar and static broth culture conditions

Category

Mutant

Phenotype

Genea

Function

  

(agar, broth)

  

Fimbrial biosynthesis and regulation

K2

-, -

fimZ

Positive regulator of type 1 fimbriae major subunit gene fimA

 

K14

-, -

fimY

Positive regulator of type 1 fimbriae major subunit gene fimA

 

K40

-, -

fimA

Major subunit of type 1 fimbriae

 

K66

-, -

fimD

Fimbrial usher protein of FimA

 

K75

-, -

fimC

Fimbrial chaperone protein of FimA

 

K44

-, -

fimH

Adhesin of type 1 fimbriae

 

K70

+, +

lpfB

Fimbrial chaperone protein of long polar fimbriae

 

K61

+, +

pefI

Regulator of plasmid-encoded fimbriae

 

K23

+, +

stbC

Fimbrial usher protein of Stb fimbriae

Putative cytoplasmic protein

K1

+, +

STM1078

Putative cytoplasmic protein

 

K28

+, +

STM4529

Putative cytoplasmic protein

Global regulator

K46

-, -

lrp

Leucine-responsive regulatory protein

 

K15

-, -

hupA

Histone-like DNA binding protein

Membrane associated protein

K17,

+, +

yhjV

Putative transporter protein

 

K39

-, -

STM1128

Putative sodium/glucose cotransporter

 

K45

-, -

yihO

Putative glycoside-pentoside-hexuronide (GPH) family transport protein

 

K50

+, +

STM2532

Putative inner membrane lipoprotein

 

K52

+, +

STM2486

Putative inner membrane protein

 

K54

-, -

yjiH

Putative inner membrane protein

 

K72

+, +

mgtB

Mg2+ transporter protein

 

K30

+, +

narK

Nitrate/nitrite transporter protein

Cell envelope associated protein

K60

+, +

ytfB

Putative cell envelope opacity-associated protein A

Periplasmic protein

K69

+, +

ydbH

Putative periplasmic protein

Ribosome modulation factor

K56

-, -

rmf

Ribosome modulation factor

Type III secretion system

K55

-, -

ssaB

Effector protein of type III secretion system

 

K59

+, +

invB

Chaperone protein for SopE/SopE2

 

K63

-, -

ssaV

Apparatus protein for intracellular trafficking and secretion

Prophage-derived protein

K11

+, +

STM4200

Putative phage tail protein H

 

K33

+, +

sseI

Gifsy-2 prophage putative type III secreted effector protein

 

K19

-, -

STM1041

Gifsy-2 prophage probable minor tail protein

Sensor protein

K51

+, +

ssrA

Sensor component of type III secretion system

 

K58

+, +

yehU

Sensor component

Transcription termination factor

K73

-, -

nusA

Transcription termination factor

Enzymes

K3

-, -

cafA

Endoribonuclease

 

K5

+, +

res

Subunit of type III restriction-modification enzyme

 

K8

+, +

STM4467

Putative arginine deiminase

 

K16

+, +

STM1627

Alcohol dehydrogenase class III

 

K31

+, +

STM2446

Putative iron-dependent peroxidase

 

K41

-, -

nuoE

NADH dehydrogenase I chain E

 

K37

+, +

yafA

Putative hydrolase

 

K43

-, -

miaA

Isopentenylpyrophosphate transferase

 

K38

-, -

prC

C-terminal protease for penicillin binding protein

 

K47

-, -

atpH

Membrane-bound ATP synthase

 

K48

+, +

ubiB

NAD(P)H-flavin reductase

 

K49

-, -

ydiF

Putative acetyl-CoA: acetoacetyl-CoA transferase

 

K53

+, +

tdK

Thymidine kinase

 

K65

+, +

pps

Phosphoenolpyruvate synthase

 

K57

+, +

ybjX

Putative enzyme with unknown function

 

K67

+, +

pncA

Nicotinamidase/pyrazinamidase

 

K68

+, +

rfaB

Lipopolysaccharide 1,6-galactosyltransferase

 

K71

+, +

xapB

Xanthosine permease

 

K64

+, +

STM1940

Putative cell wall-associated hydrolase

 

K74

+, +

cbiA

Cobyrinic acid a, c-diamide synthase

 

K42

-, -

aroA

3-enolpyruvylshikimate-5-phosphate synthetase

  1. a: The gene that was disrupted by the transposon insertion is listed. The annotation of S. Typhimurium LT2 genome is used if the transposon insertion was present in a gene which is uncharacterized and unnamed.