Table 1 Most ubiquitous genera identified from the cow fecal samples (n = 20 cows).

Clostridium spp

19.0 (3.57)

13.9–25.4

Bacteroides spp

9.26 (2.17)

5.2–13.7

Porphyromonas spp

7.34 (2.28)

2.08–11.7

Ruminococcus spp

3.57 (1.5)

0.79–6.96

Alistipes spp

6.61 (1.35)

3.54–8.71

Lachnospiraceae-like

5.7 (2.77)

2.31–12.2

Prevotella spp

5.47 (2.13)

2.31–9.89

Porphyromonas-like

6.37 (2.02)

0.61–11.21

Bacteroidales spp

4.11 (2.36)

1.1–9.9

Lachnospira spp

3.73 (2.18)

0.5–7.1

Akkermansia spp

3.42 (1.97)

0.56–8.64

Enterococcus spp

2.95 (1.91)

0.73–7.89

Firmicutes spp

1.88 (0.88)

0.36–3.9

Oscillospira spp

1.59 (0.62)

0.2–2.48

Prevotellaceae-like

2.6 (3.19)

0.1–11.03

Cytophaga spp

1.35 (0.76)

0.15–2.95

Eubacterium spp

1.31 (0.53)

0.47–2.74

Francisella spp

1.65 (0.75)

0.16–1.65

Clostridiales spp

1.15 (0.58)

0.47–2.51

Papillibacter spp

1.13 (0.75)

0.26–2.41

Spiroplasma spp

1.13 (0.52)

0.39–2.37

Sedimentibacter spp

1.04 (0.77)

0.39–3.74

Treponema spp

0.93 (0.54)

0.12–1.7

Victivallis spp

1.14 (0.86)

0.27–3.19

Peptococcus spp

0.71 (0.49)

0.16–1.94

Escherichia spp

0.68 (0.75)

0.11–3.11

Anaerotruncus spp

0.54 (0.24)

0.19–1.01

Anaerophaga spp

0.9 (0.44)

0.41–1.83

Acidaminococcus spp

0.46 (0.23)

0.15–1.16

Paenibacillus spp

0.59 (0.29)

0.13–1.15

Streptococcus spp

0.55 (0.31)

0.17–1.16

Fucophilus spp

0.53 (0.26)

0.17–1.03

Flavobacteriaceae spp

0.81 (0.94)

0.19–3.43

Alterococcus spp

0.78 (0.39)

0.26–1.53

Chryseobacterium spp

0.53 (0.29)

0.13–1.02

Catabacter spp

0.64 (0.42)

0.16–1.29

Unknown-clusterC

0.56 (0.41)

0.13–1.33

Peptostreptococcus spp

0.44 (0.30)

0.1–1.17

Roseburia spp

0.59 (0.41)

0.14–1.59

Sporobacter spp

0.41 (0.29)

0.11–1.31

Clostridiaceae-like

0.45 (0.24)

0.16–0.87

Acholeplasma spp

0.37 (0.25)

0.12–0.88

Unknown-clusterP

0.29 (0.15)

0.12–0.55