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Table 3 Oligonucleotides used in this study

From: A multicopy suppressor screening approach as a means to identify antibiotic resistance determinant candidates in Yersinia pestis

Namea

Sequence

Robfor1

5'-TCTAGACGCTTTTTAACACACTGTACCAGT-3'

Robrev1

5'-GAATTCATTTAGATATGCCAGCACTTGATGA-3'

16sRNAF

5'-ATGACCAGCCACACTGGAACTGA-3'

16sRNAR

5'-TGACTTAACAAACCGCCTGCGT-3'

y3392F

5'-AGCGGCACCTTGGTCAATATTGT-3'

y3392R

5'-CAATTTGGTTATCCACCGATTCA-3'

y1050F

5'-GCTTATGACAGTGCAAAAGGTGA-3'

y1050R

5'-GATTAATGCGTGCAGACTCCAGT-3'

y0702F

5'-TATACCCAAGTGCGGGCACCCAT-3'

y0702R

5'-CATTCGCTACTGTGTCATTGCCT-3'

y3402F

5'-TCGATGCCACTGAATAGCGATCT-3'

y3402R

5'-ATCTGGTGAACGCAATAACGAGT-3'

y1439F

5'-CAGCCATCAAGAGGCTGCCCCAA-3'

y1439R

5'-ACCAAAGGCATCGACGCTGCCGA-3'

y1087F

5'-GGTGCTATCAGCGTATCTCACCT-3'

y1087R

5'-CCATACCGATGGGTAATGAGTAT-3'

y0060F

5'-GCAACCTGCTGATGAAGAACATA-3'

y0060R

5'-CACGAATCGCCTGACTGTGTGTT-3'

y0844F

5'-CGTTGCTAAACCGACTGGGTGAA-3'

y0844R

5'-TTGCGACAAAACATGCAGCCACA-3'

y0922F

5'-CGGCAGTGTGGTCAGTGTTCATT-3'

y0922R

5'-CACCCGACGCTTCAGGTCATTTT-3'

y1191F

5'-TCCTTAACCAGCTCTTCCACGGT-3'

y1191R

5'-CTTTATCTTCGCTGATCACCGGA-3'

y1386F

5'-GTGGTCAGGACACTAGCCATGGT-3'

y1386R

5'-CCTGCGTCAGTTGGACTTCGTAA-3'

y1481F

5'-AAAGCACAGAAGCAGGTGACTGT-3'

y1481R

5'-TTGTTGCTGACGCTGGTAGGTGA-3'

y1874F

5'-TTACCGACTATCGCACGTGACCT-3'

y1874R

5'-TTGTAGCACACGGGCAAACGTCA-3'

y1945F

5'-CCTGATGATGAGATGGTACGTAA-3'

y1945R

5'-TGAACTGAAGTTGAGGGCAATCT-3'

y2242F

5'-TTTAGTGACACTGATTGGTGGGA-3'

y2242R

5'-CATGATGCTCACCTGACTCAACA-3'

y3180F

5'-GGTAATGATGGTGGCTAATGGTT-3'

y3180R

5'-CAACCGAGCCAAGTAAGATCGCA-3'

y3558F

5'-GCCATTGATCCTGTTATCGGCTA-3'

y3558R

5'-ATAGGGAACAGATGAATGCCACA-3'

y4041F

5'-TTACGACCACAACGGTAGATGAA-3'

y4041R

5'-CATTGGTGCGGCAAGGTTCATAT-3'

y4067F

5'-GATATGATCCAGCCAGGTATGCT-3'

y4067R

5'-GCACCGATAAAGCACAAGCCAAT-3'

y0010F

5'-TCGCCGAAAGCCTTAACCGTTCT-3'

y0010R

5'-CCGAGAACGCACTAAGAAAGCCA-3'

y0178F

5'-TTTACCGCAGACGTGGTCGCTAT-3'

y0178R

5'-CCTACTGGACTCCCGTTGCTTCT-3'

y0613F

5'-GGGCTATTGGCCTGAAGTATTCT-3'

y0613R

5'-AAGCTTAGTATCCGCGCCAGACT-3'

y1017F

5'-AAATGACTCCGCTAGAGCTTCGA-3'

y1017R

5'-GGTTTACGACCGATACGATCAGA-3'

y1039F

5'-GCCGTGAATGGCACCGTTATGTA-3'

y1039R

5'-AGTTTGCCGACTCAGCTGACGAT-3'

y1948F

5'-CTGCCTGTAGTGCTGGCTTCTTT-3'

y1948R

5'-AGTACAGGGCAATCATGCTGCCA-3'

y2000F

5'-TGGCGATTATTGCCGAAGTGGTT-3'

y2000R

5'-AAAGGTGGCAGCGATTGAGACCA-3'

y2108F

5'-GGTTGTATATCAGCGGTAGTTCT-3'

y2108R

5'-TTGCACGAAAGTGTTTAGACGCT-3'

y2173F

5'-ACAAGGTGTCTCGGTATGCTGCA-3'

y2173R

5'-ATAATGCCAGGAACCAGAACGCT-3'

y2272F

5'-TTGGTATCGCAAGCTCGAAGCTT-3'

y2272R

5'-TCGCATTAGCATCCCGGTGACAA-3'

y2653F

5'-ATGACCGTCAATGCGACCATCGT-3'

y2653R

5'-AATGGCCATTGCCAGCATCCATA-3'

y2814F

5'-TCTGGACCAGGCAGTAACCGATT-3'

y2814R

5'-TACTCATATCGGCCAGGGTCAGA-3'

y2916F

5'-CCTTGGGTTGTTGTCGATGCTGA-3'

y2916R

5'-ACATGCCATACCTGCAAGCGCAA-3'

y3186F

5'-GTCAGTTGGACGTTACTGCTAAT-3'

y3186R

5'-CTTTCTTGCCATAAGCGACGACA-3'

y3760F

5'-TCTGGATATTCGCCGTGCAGAGA-3'

y3760R

5'-CGTGGTAAACAGACGCTCTGGAA-3'

y3516F

5'-TGCAACGACTAACCTGTATCAGT-3'

y3516R

5'-TTTGGCGAGTAGTATTCTCTGGT-3'

  1. a Primers used for qRT-PCR were named according to the University of Wisconsin gene designations for the Y. pestis KIM genome, except for 16sRNAF-R (used to amplify 16s rRNA).