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Table 1 Chromosomal regions unique to V. parahaemolyticus strains RIMD2210633 and AQ3810

From: Molecular analysis of the emergence of pandemic Vibrio parahaemolyticus

ORFs Region type Size % GC Int AQ3810 Reference
Chromosome I       
VP0081 – VP0092 NK 10 48 - Present This study
VP0218 – VP0234 LPS 46 40 - Present This study
VP0380 – VP0403 VPaI-1 24 42 Int Absent [26]
VP0634 – VP0643 VPaI-2 10 45 Int Absent [26]
VP1071 – VP1095 VPaI-3 32 42 Int Partial [26]
VP1386 – VP1420 T6SS 57 43 - Absent This study
VP1549 – VP1590 phage f237 25 46 Int Absent [33]
VP1658 – VP1702 T3SS-1 35 47 - Present [26]
VP1719 – VP1728 Osmotolerance 12 46 - Present [47]
VP1787 – VP1865 Integron class-1 48 40 Int Absent This study
VP2131 – VP2144 VPaI-4 17 39 Int Absent [26]
VP2900 – VP2910 VPaI-5 12 38 Int Absent [26]
Chromosome II       
VPA0434 – VPA0458 Degradative 29 46 Int Partial This study
VPA0887 – VPA0914 phage f237-like 16 47 Int Present This study
VPA0950 – VPA0962 Biofilm 22 47   Present This study
VPA0989 – VPA0999 Gametolysin 18 45   Present This study
VPA1102 – VPA1115 Osmotolerance 17 46   Present [47]
VPA1253 – VPA1270 VPaI-6 27 43 Int Absent [26]
VPA1312 – VPA1395 VPaI-7 (T3SS-2) 81 39 Tnp Present [26]
VPA1403 – VPA1412 CPS 13 47   Present This study
VPA1440 – VPA1444 Type I secretion 20 47   Present This study
VPA1503 – VPA1521 Type I pilus 20 45   Present This study
VPA1559 – VPA1583 Multidrug efflux 22 46   Present This study
VPA1652 – VPA1679 Ferric uptake 25 50   Present This study