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Table 1 Frequency of 51 shared spoligotypes (SITs) according to Brudey et al. [14], identifiedin 173 Mycobacterium tuberculosis strains isolated in Paraguay, 2003

From: First insight into Mycobacterium tuberculosis genetic diversity in Paraguay

SIT Octal Number Strains in this study Strains in SpolDB4 % in this study as compared to SpolDB4 Lineage
   n % n %   
42 777777607760771 40 18.2 1926 4.5 2.1 LAM
391 743777607760731 21 9.5 23 0.1 91.3 LAM
34 776377777760771 16 7.3 618 1.4 2.6 S
50 777777777720771 9 4.1 2128 5.0 0.4 Haarlem
93 777737607760771 6 2.7 267 0.6 2.2 LAM
521 777777777760611 6 2.7 22 0.1 27.3 T
52 777777777760731 4 1.8 518 1.2 0.8 T
159 777740017760771 4 1.8 64 0.2 6.3 unknown
4 000000007760771 3 1.4 220 0.5 1.4 unknown
53 777777777760771 3 1.4 3738 8.8 0.1 T
177 377777607760771 3 1.4 50 0.1 6.0 LAM
1356 776377777760751 3 1.4 12 0.0 25.0 S
1827 777703600020771 3 1.4 6 0.0 50.0 Haarlem
1832 777773607760771 3 1.4 14 0.0 21.4 LAM
7 377777777760771 2 0.9 54 0.1 3.7 T
33 776177607760771 2 0.9 770 1.8 0.3 LAM
36 777737777720771 2 0.9 77 0.2 2.6 T
47 777777774020771 2 0.9 1021 2.4 0.2 Haarlem
49 777777777720731 2 0.9 115 0.3 1.7 Haarlem
60 777777607760731 2 0.9 178 0.4 1.1 LAM
95 777777607560731 2 0.9 30 0.1 6.7 LAM
125 000000007760731 2 0.9 55 0.1 3.6 unknown
737 777777607760571 2 0.9 11 0.0 18.2 LAM
753 477777607760771 2 0.9 16 0.0 12.5 LAM
828 377777607760731 2 0.9 20 0.0 10.0 LAM
1803 617777607760771 2 0.9 7 0.0 28.6 LAM
1 000000000003771 1 0.5 5610 13.2 0.0 Beijing
2 000000004020771 1 0.5 337 0.8 0.3 Haarlem
17 677737607760771 1 0.5 473 1.1 0.2 LAM
20 677777607760771 1 0.5 588 1.4 0.2 LAM
56 777737770000000 1 0.5 18 0.0 5.6 unknown
58 777777557760771 1 0.5 119 0.3 0.8 unknown
62 777777774020731 1 0.5 233 0.5 0.4 Haarlem
92 700076777760771 1 0.5 328 0.8 0.3 X
102 777703777760771 1 0.5 56 0.1 1.8 unknown
162 777777607760671 1 0.5 17 0.0 5.9 unknown
211 776137607760771 1 0.5 63 0.1 1.6 LAM
254 777760007760771 1 0.5 120 0.3 0.8 LAM
393 777757777760771 1 0.5 19 0.0 5.3 T
397 777777600000771 1 0.5 13 0.0 7.7 unknown
439 777376777760601 1 0.5 3 0.0 33.3 X
578 637777607760771 1 0.5 27 0.1 3.7 LAM
746 777777777520771 1 0.5 22 0.1 4.5 Haarlem
765 777760077760771 1 0.5 7 0.0 14.3 LAM
781 000000004020731 1 0.5 9 0.0 11.1 Haarlem
784 776377777760731 1 0.5 39 0.1 2.6 S
1063 776377777660771 1 0.5 24 0.1 4.2 S
1367 377737607760771 1 0.5 3 0.0 33.3 LAM
1610 763777607560771 1 0.5 5 0.0 20.0 LAM
1892 777777660000171 1 0.5 5 0.0 20.0 unknown
2644 177777777720771 1 0.5 3 0.0 33.3 Haarlem