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Table 5 Properties of the NgoΦ3 CDS' sequences

From: Characterization of the dsDNA prophage sequences in the genome of Neisseria gonorrhoeae and visualization of productive bacteriophage

NgoΦ3 CDSs Genome position Length (aa) Putative function Significant matches to proteins in GeneBank (Scores represent filtered BLASTP % identities over stated number of amino acid)
NGO1613 1592225–1593043 384 integrase [Xylella fastidiosa Dixon] (phage integrase family) 0524 35,52% on,367, [Pseudomonas syringe tomato str. DC3000] 24,38% on 340, int [Azoarcus sp. EbN1] 25,42% on 365
NGO1614 1595199–1595750 88 NS  
NGO1625 1596026–1596241 138 NS  
NGO1626 1583028–1584182 215 conserved hypothetical protein CDS21 [Bacteriophage bIL311] (pfam GepA,) 29,48% on 116
NGO1627 1584232–1584498 133 hypothetical protein HP2p14 protein [Haemophilus phage (pfam UPFO150 family) HP2] 34,54% on 129
NGO1628 1590177–1590593 60 conserved hypothetical protein [HP1p18] protein [Haemophilus (COG1724) phage HP1] 60,74% on 51
NGO1629 1590602–1591249 272 NS  
NGO1634 1591369–1591770 183 hypothetical protein hypothetical protein [P27p17] [Bacteriophage P27] 30,51% on 147 replication protein [SfVp87] [Shigella flexneri bacteriophage V] 32,54% on 87
NGO1635 1591873–1592055 71 NS  
NGO1636 1596419–1597036 205 DnaC-like protein [STM2625] protein [Phage Gifsy-1] (pfam IstB family) 37,51% on 201, replication protein DnaC [Bacteriophage P27] 37,56% on 192
NGO1637 1597106–1597261 51 NS  
NGO1639 1597884–1598387 167 hypothetical protein NMB1116 [Neisseria meningitidis MC58] 88,96% on 27
NGO1651 1608278–1608616 113 Neisseria-specific protein, uncharacterized  
NGO1652 1609818–1608823 332 putative antirepressor protein Ant [Bacteriophage (pfam Bro-N family) 1085 Aaphi23]