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Table 2 List of novel genes detected in the P. brasiliensis transition library.

From: The transcriptome analysis of early morphogenesis in Paracoccidioides brasiliensis mycelium reveals novel and induced genes potentially associated to the dimorphic process

Functional categories

Gene Product

Best hit/Accession number

e-value

E.C. number

Amino acid metabolism

Diphthine synthase#

Aspergillus fumigatus/CAF32112

1e-38

2.1.1.98

 

Acetylornithine deacetylase

Arabidopsis thaliana/BP845946.1

1e-31

3.5.1.16

 

Histidine ammonia-lyase

Dictyostelium discoideum/XP_636944.1

1e-16

4.3.1.3

 

Glutamate dehydrogenase (NADP(+))

Emericella nidulans/S04904

5e-06

1.4.1.4

Nucleotide metabolism

Nudix hydrolase family protein

Aspergillus nidulans/XP_409279.1

1e-19

-

 

Adenosine deaminase

Aspergillus oryzae/BAE60718

2e-34

3.5.4.4

 

Orotate phosphoribosyltransferase

Mortierella alpina/BAD29963.1

3e-45

2.4.2.10

Phosphate metabolism

phnO protein

Rhizopus oryzae/EE002192.1

4e-116

-

C-compound and carbohydrate metabolism

Chitinase 3#

Coccidioides immitis/AAO88269

7e-40

3.2.1.14

 

Alpha-glucosidase I#

Aspergillus fumigatus/AAR23808

3e-46

3.2.1.106

 

Glycerol-3-phosphate dehydrogenase (NAD(P)+)

Cryptococcus neoformans/AAM26266.1

2e-14

1.1.1.94

Lipid metabolism

Phosphatidylserine synthase#

Neurospora crassa/EAA30566.1

6e-38

2.7.8.8

Metabolism of vitamins, cofactors and prosthetic groups

Uroporphyrinogen III methylase

Rhizopus oryzae/EE010378.1

6e-109

2.1.1.107

Energy

Xanthine dehydrogenase

Gibberella zeae/XP_381737.1

9e-07

1.17.1.4

 

Acetyl CoA hydrolase

Aspergillus nidulans/XP_405684.1

5e-42

3.1.2.1

Cell cycle and DNA processing

Rad21 region protein

Neurospora crassa/EAA34981.1

6e-17

-

 

Proliferating Cell Nuclear Antigen (PCNA)

Aspergillus nidulans/XP_404552.1

3e-36

-

 

Uracil-DNA glycosylase

Aspergillus fumigatus/XP_749743

3e-24

3.2.2.-

 

Chromosome segregation ATPase

Coccidioides immitis/EAS30662

6e-52

-

Transcription

DEAD-like helicases superfamily protein#

Aspergillus nidulans/XP_410144.1

3e-55

-

 

Transcription factor, bromodomain

Aspergillus nidulans/EAA60972

2e-55

-

 

GatB/YqeY domain protein

Aspergillus nidulans/XP_410874.1

1e-22

-

 

Ring type Zinc finger protein

Aspergillus nidulans/XP_411042.1

1e-12

-

 

Zinc finger domain protein

Aspergillus nidulans/XP_405585.1

3e-14

-

 

Arylsulfatase regulatory protein

Blastocladiella emersonii/CO964913.1

1e-138

-

 

Transcriptional activator protein

Coccidioides immitis/EAS34609

8e-26

-

Protein Synthesis

14 kDa mitochondrial ribosomal protein

Aspergillus nidulans/XP_408748.1

4e-46

-

 

Translation initiation factor 3 subunit 2

Aspergillus nidulans/XP_660601

6e-80

-

Protein fate

Rab geranylgeranyl transferase

Aspergillus nidulans/XP_412816.1

8e-13

2.5.1.60

 

Guanosine diphosphatase#

Aspergillus nidulans/XP_405219.1

2e-15

3.6.1.42

 

Ubiquitin thiolesterase otubain-like protein

Aspergillus nidulans/ EAA60354

1e-28

3.4.-.-

 

Non-ATPase regulatory subunit of the 26S proteasome

Aspergillus nidulans/XP_408912.1

2e-68

-

 

Peptidase M28 domain protein

Coccidioides immitis/EAS33583

1e-22

3.4.11.15

 

Alpha -1, 2-galactosyltransferase#

Aspergillus nidulans/XP_406106.1

3e-14

2.4.1.-

Transport Facilitation

Uridine diphosphate N-Acetylglucosamine transporter#

Neurospora crassa/T50997

9e-30

-

 

Nuclear pore protein 84/107

Coccidioides immitis/EAS31445.1|

2e-13

-

 

Regulator of V-ATPase in vacuolar membrane protein

Aspergillus nidulans/XP_404840.1

9e-59

-

 

Tctex-1 family protein

Aspergillus nidulans/XP_405470.1

6e-25

-

 

Importin-beta N-terminal domain

Aspergillus nidulans/XP_410143.1

1e-44

-

Signal Transduction

Two-component sensor kinase

Anopheles gambiae/EAA02130.2

2e-38

-

 

Histidine protein kinase sensor for GlnG regulator#

Tetrahymena thermophila/EAR83219.1

2e-04

2.7.3.13-

 

UVSB Phosphatidylinositol – 3 kinase#

Aspergillus nidulans/XP_411112.1

1e-29

-

 

Rho GTPase activating protein

Aspergillus nidulans/XP_407883.1

3e-49

-

 

Calcineurin subunit b

Neurospora crassa/P87072

1e-77

-

 

Forkhead associated (FHA) protein

Gibberella zeae/XP_389397.1

4e-10

-

Cell Rescue, Defense and Virulence

Hemolysin like protein#

Aspergillus nidulans/XP_406013.1

2e-70

-

Cell type differentiation

Suppressor of anucleate metulae B protein#

Aspergillus nidulans/XP_404215.1

6e-46

-

Unclassified

Complex 1 protein (LYR family)

Aspergillus nidulans/XP_408902.1

8e-32

-

  1. #Transcripts confirmed by semi-quantitative RT-PCR.