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Table 2 List of novel genes detected in the P. brasiliensis transition library.

From: The transcriptome analysis of early morphogenesis in Paracoccidioides brasiliensis mycelium reveals novel and induced genes potentially associated to the dimorphic process

Functional categories Gene Product Best hit/Accession number e-value E.C. number
Amino acid metabolism Diphthine synthase# Aspergillus fumigatus/CAF32112 1e-38 2.1.1.98
  Acetylornithine deacetylase Arabidopsis thaliana/BP845946.1 1e-31 3.5.1.16
  Histidine ammonia-lyase Dictyostelium discoideum/XP_636944.1 1e-16 4.3.1.3
  Glutamate dehydrogenase (NADP(+)) Emericella nidulans/S04904 5e-06 1.4.1.4
Nucleotide metabolism Nudix hydrolase family protein Aspergillus nidulans/XP_409279.1 1e-19 -
  Adenosine deaminase Aspergillus oryzae/BAE60718 2e-34 3.5.4.4
  Orotate phosphoribosyltransferase Mortierella alpina/BAD29963.1 3e-45 2.4.2.10
Phosphate metabolism phnO protein Rhizopus oryzae/EE002192.1 4e-116 -
C-compound and carbohydrate metabolism Chitinase 3# Coccidioides immitis/AAO88269 7e-40 3.2.1.14
  Alpha-glucosidase I# Aspergillus fumigatus/AAR23808 3e-46 3.2.1.106
  Glycerol-3-phosphate dehydrogenase (NAD(P)+) Cryptococcus neoformans/AAM26266.1 2e-14 1.1.1.94
Lipid metabolism Phosphatidylserine synthase# Neurospora crassa/EAA30566.1 6e-38 2.7.8.8
Metabolism of vitamins, cofactors and prosthetic groups Uroporphyrinogen III methylase Rhizopus oryzae/EE010378.1 6e-109 2.1.1.107
Energy Xanthine dehydrogenase Gibberella zeae/XP_381737.1 9e-07 1.17.1.4
  Acetyl CoA hydrolase Aspergillus nidulans/XP_405684.1 5e-42 3.1.2.1
Cell cycle and DNA processing Rad21 region protein Neurospora crassa/EAA34981.1 6e-17 -
  Proliferating Cell Nuclear Antigen (PCNA) Aspergillus nidulans/XP_404552.1 3e-36 -
  Uracil-DNA glycosylase Aspergillus fumigatus/XP_749743 3e-24 3.2.2.-
  Chromosome segregation ATPase Coccidioides immitis/EAS30662 6e-52 -
Transcription DEAD-like helicases superfamily protein# Aspergillus nidulans/XP_410144.1 3e-55 -
  Transcription factor, bromodomain Aspergillus nidulans/EAA60972 2e-55 -
  GatB/YqeY domain protein Aspergillus nidulans/XP_410874.1 1e-22 -
  Ring type Zinc finger protein Aspergillus nidulans/XP_411042.1 1e-12 -
  Zinc finger domain protein Aspergillus nidulans/XP_405585.1 3e-14 -
  Arylsulfatase regulatory protein Blastocladiella emersonii/CO964913.1 1e-138 -
  Transcriptional activator protein Coccidioides immitis/EAS34609 8e-26 -
Protein Synthesis 14 kDa mitochondrial ribosomal protein Aspergillus nidulans/XP_408748.1 4e-46 -
  Translation initiation factor 3 subunit 2 Aspergillus nidulans/XP_660601 6e-80 -
Protein fate Rab geranylgeranyl transferase Aspergillus nidulans/XP_412816.1 8e-13 2.5.1.60
  Guanosine diphosphatase# Aspergillus nidulans/XP_405219.1 2e-15 3.6.1.42
  Ubiquitin thiolesterase otubain-like protein Aspergillus nidulans/ EAA60354 1e-28 3.4.-.-
  Non-ATPase regulatory subunit of the 26S proteasome Aspergillus nidulans/XP_408912.1 2e-68 -
  Peptidase M28 domain protein Coccidioides immitis/EAS33583 1e-22 3.4.11.15
  Alpha -1, 2-galactosyltransferase# Aspergillus nidulans/XP_406106.1 3e-14 2.4.1.-
Transport Facilitation Uridine diphosphate N-Acetylglucosamine transporter# Neurospora crassa/T50997 9e-30 -
  Nuclear pore protein 84/107 Coccidioides immitis/EAS31445.1| 2e-13 -
  Regulator of V-ATPase in vacuolar membrane protein Aspergillus nidulans/XP_404840.1 9e-59 -
  Tctex-1 family protein Aspergillus nidulans/XP_405470.1 6e-25 -
  Importin-beta N-terminal domain Aspergillus nidulans/XP_410143.1 1e-44 -
Signal Transduction Two-component sensor kinase Anopheles gambiae/EAA02130.2 2e-38 -
  Histidine protein kinase sensor for GlnG regulator# Tetrahymena thermophila/EAR83219.1 2e-04 2.7.3.13-
  UVSB Phosphatidylinositol – 3 kinase# Aspergillus nidulans/XP_411112.1 1e-29 -
  Rho GTPase activating protein Aspergillus nidulans/XP_407883.1 3e-49 -
  Calcineurin subunit b Neurospora crassa/P87072 1e-77 -
  Forkhead associated (FHA) protein Gibberella zeae/XP_389397.1 4e-10 -
Cell Rescue, Defense and Virulence Hemolysin like protein# Aspergillus nidulans/XP_406013.1 2e-70 -
Cell type differentiation Suppressor of anucleate metulae B protein# Aspergillus nidulans/XP_404215.1 6e-46 -
Unclassified Complex 1 protein (LYR family) Aspergillus nidulans/XP_408902.1 8e-32 -
  1. #Transcripts confirmed by semi-quantitative RT-PCR.