Chromosome | VNTR Locus Name | Array start position in K96243 | Consensus Repeat sequence | In CDS | Array Size in K96243 (bpxcopy#) | Amplicon Size Range (bp) | Number of Alleles | Nei's Diversity |
---|---|---|---|---|---|---|---|---|
Large | 933 k | 933861 | CGGCGAGGGAAA | no | 12 × 10 | 160–365 | 16 | 0.89 |
Small | 2065 k | 2064726 | TCGAGTCA | no | 8 × 8 | 238–370 | 21 | 0.9 |
Large | 2971 k | 2971247 | CGTGCTT | no | 7 × 9 | 201–314 | 22 | 0.92 |
Large | 3145 k | 3144932 | CCTTCCTCG | no | 9 × 8 | 220–345 | 14 | 0.86 |
Large | 2666 k | 2666129 | CTTTCGCTA | yes | 9 × 7 | 268–332 | 8 | 0.79 |
Large | 3671 k | 3671327 | CTTGGAC | no | 7 × 21 | 205–364 | 23 | 0.93 |
Small | 2115 k | 2115424 | CGCCGGTT | no | 8 × 15d | 290–399 | 15 | 0.83 |
Large | 2341 k | 2340566 | TTCGTGCGC | no | 9 × 7 | 122–219 | 10 | 0.8 |
Large | 1500 k | 1500968 | GGGAAAGTGCG | no | 11 × 6 | 312–379 | 7 | 0.55 |
Small | 3091 k | 3091444 | TCACGGC | no | 7 × 12 | 202–287 | 11 | 0.86 |
Large | 3152 k | 3152382 | GACTCG | no | 6 × 17 | 160–371 | 26 | 0.94 |
Large | 3652 k | 3651903 | CCGTAGTC | no | 8 × 8 | 320–408 | 13 | 0.87 |
Large | 3564 k | 3563188 | GCAGCCTTCTTCGCG | yes | 15 × 30d | 295–692 | 10 | 0.63 |
Large | 20 k | 20292 | CGCCTCA | no | 7 × 10 | 245–435 | 22 | 0.92 |
Small | 857 k | 857207 | CGAAYGAGC | no | 9 × 11 | 209–300 | 12 | 0.81 |
Small | 1690 k | 1689945 | CGTCGATA | no | 8 × 13 | 252–405 | 13 | 0.78 |
Small | 2445 k | 2444540 | GGCACTTC | no | 8 × 19 | 205–391 | 19 | 0.89 |
Small | 1367 k | 1366924 | CGCRTCGAA | yes | 9 × 24 | 454–686 | 26 | 0.92 |
Small | 1764 k | 1764166 | GCCGCTGAAGTT | no | 12 × 20 | 233–466 | 12 | 0.47 |
Large | 2815 k | 2815153 | TGGCGTCTT | yes | 9 × 7 | 223–439 | 19 | 0.86 |
Large | 2170 k | 2171435 | ATGCCGTGG | no | 9 × 24 | 229–513 | 25 | 0.93 |
Small | 389 k | 388768 | GACGAACC | no | 8 × 6 | 224–313 | 12 | 0.87 |
Small | 1788 k | 1788368 | GTCGTGCGATCCTGCT | no | 16 × 8 | 203–367 | 11 | 0.86 |
Large | 1217 k | 1217379 | CGGACCTAGG | no | 10 × 15 | 357–480 | 14 | 0.85 |
Small | 397 k | 397146 | GCCCGAGA | no | 8 × 12 | 226–401 | 17 | 0.88 |
Small | 2050 k | 2049749 | CGATGCGGT/GCACCCAAC | yes/yes | 9 × 8/9 × 8 | 377–549 | 18 | 0.92 |
Small | 2862 k | 2861834 | CTCGCCTTTG | no | 10 × 8 | 273–422 | 15 | 0.88 |
Large | 140 k | 139952 | GCGCCGAA | no | 8 × 15 | 367–675 | 28 | 0.93 |
Large | 2356 k | 2356018 | CTTGGCGA | no | 8 × 13 | 236–425 | 16 | 0.9 |
Small | 2518 k | 2517929 | CCGCGAT | no | 7 × 31 | 294–394 | 17 | 0.92 |
Small | 2124 k | 2123866 | CCTTCGCG | no | 8 × 23 | 332–490 | 14 | 0.88 |
Small | 1934 k | 1933513 | CGAGTCGGCGGTT | no | 13 × 16 | 224–645 | 21 | 0.91 |