Table 8 Genes of DNA photolyase/cryptochrome protein family investigated in the phylogenetic analysis. The organisms are listed in alphabetic order within the taxa.
From: Genome analysis of DNA repair genes in the alpha proteobacterium Caulobacter crescentus
Organisms (Abbreviation) | Division | Acession number |
|---|---|---|
Haloarcula marismortui ATCC 43049 | Archaea | gi|55377670 |
Halobacterium sp | Archaea. | gi|10581208; gi|10580849 |
Natronomonas pharaonis DSM 2160 | Archaea | gi|76802655 |
Bacillus cereus ATCC 10987 | Firmicutes | gi|42738164 |
Streptococcus pyogenes | Firmicutes | gi|13622594 |
Agrobacterium tumefaciens str. C58 | Alpha- proteobacteria | gi|17935123 |
Caulobacter crescentus | Alpha- proteobacteria | gi|13422791 |
Mesorhizobium loti | Alpha -proteobacteria | gi|14027464 |
Burkholderia pseudomallei | Beta-proteobacteria | gi|76578109 |
Chromobacterium violaceum | Beta-proteobacteria | gi|34498936 |
Methylobacillus flagellatus | Beta-proteobacteria | gi|91708933 |
Neisseria meningitidis | Beta-proteobacteria | gi|7380817 |
Neisseria gonorrhoeae | Beta-proteobacteria | gi|59802028 |
Buchnera aphidicola | Gamma-proteobacteria | gi|11133758 |
Escherichia coli. | Gamma-proteobacteria | gi|16128683 |
Pseudomonas aeruginosa | Gamma-proteobacteria | gi|15599855 |
Salmonella typhimurium LT2 | Gamma-proteobacteria | gi|16419217 |
Vibrio cholerae | Gamma-proteobacteria | gi|9657440 |
Brassica napus | Eukaryote | gi|94965681 |
Lycopersicon esculentum | Eukaryote | gi|8101442 |
Oryza sativa | Eukaryote | gi|28201254; gi|21740729 |
Adiantum capillus-veneris | Eukaryote | gi|3551225; gi|3551223 |
Arabidopsis thaliana | Eukaryote | gi|30678870 |