Table 2 Genes encoding putative DNA repair proteins for Nucleotide Excision Repair
From: Genome analysis of DNA repair genes in the alpha proteobacterium Caulobacter crescentus
Genes in E. coli(protein size) | Description | Orthologs in C. crescentus | Similarity with E. colia |
|---|---|---|---|
mfd (1148 aa) | transcription-repair coupling factor | CC1844 | 641/1113 (57%) |
uvrA (940 aa) | DNA damage recognition protein UvrA | CC2590 | 716/944 (75%) |
uvrB (673 aa) | DNA damage binding protein UvrB | CC2981 | 481/668 (72%) |
uvrC (610 aa) | excision nuclease UvrC | 1-CC2881; | 360/608 (59%) |
| Â | UvrC-N-terminal like protein, endonuclease | 2-CC3518; | absent |
| Â | Â | 3-CC1343; | absent |
| Â | Â | 4-CC0707 | absent |
uvrD (720 aa) | DNA-dependent ATPase I and helicase II | CC1528 | 373/636 (58%) |