Table 4 Proteins that are specific for the Rhodobacterales
From: Phylogenomics and signature proteins for the alpha Proteobacteria and its main groups
Gene ID | Accession Number | Function | Gene ID | Accession Number | Function |
|---|---|---|---|---|---|
A. Proteins specific for Rhodobacterales ( Oceanicola, Loktanella, Paracoccus, Roseovarius, Roseobacter, Jannaschia, Silicibacte r, Sulfitobacter, Dinoroseobacter, Sagittula ) | |||||
TM1040_00931 | YP_612088 | Hypothetical | TM1040_1842 | YP_613837 | Phasin, PhaP |
TM1040_01842 | YP_612179 | Hypothetical | TM1040_19673 | YP_613961 | Putative CheA signal transduction |
TM1040_02361,2 | YP_612231 | Hypothetical | TM1040_1988 | YP_613982 | Hypothetical |
TM1040_0471 | YP_612466 | Putative rod shape-determining protein MreD | TM1040_22632 | YP_614257 | Hypothetical |
TM1040_05862 | YP_612581 | Hypothetical | TM1040_2370 | YP_614364 | Hypothetical |
TM1040_05872 | YP_612582 | Hypothetical | TM1040_24253 | YP_614419 | Hypothetical |
TM1040_0697 | YP_612692 | Hypothetical | TM1040_2466 | YP_614460 | GCN5-related N-acetyltransferase COG045 |
TM1040_07502,4 | YP_612745 | Hypothetical | TM1040_24872 | YP_614481 | Hypothetical |
TM1040_07521 | YP_612747 | Lipoprotein, putative | TM1040_25823 | YP_614576 | Hypothetical |
TM1040_1063 | YP_613058 | Gene transfer agent | TM1040_2999 | YP_614993 | Hypothetical |
TM1040_1064 | YP_613059 | Gene transfer agent | TM1040_30773 | YP_611313 | Hypothetical |
TM1040_12473 | YP_613242 | Hypothetical | TM1040_3749 | YP_611978 | Hypothetical |
TM1040_13502 | YP_613345 | Hypothetical | TM1040_3759 | YP_611988 | Lipoprotein, putative |
TM1040_1406 | YP_613401 | Outer membrane chaperone Skp (OmpH) | TM1040_37643 | YP_611993 | Putative transmembrane protein |
TM1040_1567 | YP_613562 | Hypothetical | Â | Â | Â |
B. Proteins unique to various Rhodobacterales but missing in Rhodobacter and Paracoccus | |||||
TM1040_15581 | YP_613553 | Hypothetical | TM1040_21574 | YP_614151 | Hypothetical |
TM1040_17351 | YP_613730 | Hypothetical | TM1040_24431,4 | YP_614437 | Lipolytic enzyme, G-D-S-L |
TM1040_18441,5,6 | YP_613839 | Hypothetical | TM1040_26807 | YP_614674 | Hypothetical |
C. Proteins Unique to Silicibacter and Roseobacter | |||||
TM1040_10998 | YP_613094 | Hypothetical | TM1040_3189 | YP_611425 | Â |
TM1040_14238 | YP_613418 | Hypothetical | TM1040_32028 | YP_611438 | Â |
TM1040_1451 | YP_613446 | Hypothetical | TM1040_32088 | YP_611444 | Â |
TM1040_19868 | YP_613980 | Hypothetical | TM1040_32268 | YP_611462 | Â |
TM1040_2106 | YP_614100 | Hypothetical | TM1040_35298 | YP_611763 | Â |
TM1040_21398 | YP_614133 | Hypothetical | TM1040_36268 | YP_611855 | Â |
TM1040_30758 | YP_611311 | Hypothetical | Â | Â | Â |