From: Phylogenomics and signature proteins for the alpha Proteobacteria and its main groups
Species Name | Order | Family | Genome Size (Mb) | GC content (%) | Protein Number | Reference |
---|---|---|---|---|---|---|
Bartonella bacilliformis KC583 | Rhizobiales | Bartonellaceae | 1.4 | 38.2 | 1283 | TIGR |
Bartonella henselae str. Houston-1 | Rhizobiales | Bartonellaceae | 1.93 | 38.2 | 1488 | [7] |
Bartonella quintana str. Toulouse * | Rhizobiales | Bartonellaceae | 1.58 | 38.8 | 1142 | [7] |
Bradyrhizobium japonicum USDA 110* | Rhizobiales | Bradyrhizobiaceae | 9.1 | 64.1 | 8317 | [5] |
Bradyrhizobium japonicum BT Ail | Rhizobiales | Bradyrhizobiaceae | 8.53 | 64.8 | 7622 | DOE-JGI |
Bradyrhizobium sp. ORS278 | Rhizobiales | Bradyrhizobiaceae | 7.5 | 65.5 | 6717 | Genoscope |
Nitrobacter hamburgensis X14 | Rhizobiales | Bradyrhizobiaceae | 5.01 | 61.6 | 4326 | DOE-JGI |
Nitrobacter winogradskyi Nb-255* | Rhizobiales | Bradyrhizobiaceae | 3.4 | 2.5 | 3122 | [42] |
Rhodopseudomonas palustris BisA53 | Rhizobiales | Bradyrhizobiaceae | 5.51 | 64.4 | 4878 | DOE-JGI |
Rhodopseudomonas palustris BisB18 | Rhizobiales | Bradyrhizobiaceae | 5.51 | 65.0 | 4886 | DOE-JGI |
Rhodopseudomonas palustris BisB5 | Rhizobiales | Bradyrhizobiaceae | 4.89 | 64.8 | 4397 | DOE-JGI |
Rhodopseudomonas palustris CGA009 | Rhizobiales | Bradyrhizobiaceae | 5.47 | 65.0 | 4820 | [41] |
Rhodopseudomonas palustris HaA2 | Rhizobiales | Bradyrhizobiaceae | 5.33 | 66.0 | 4683 | DOE-JGI |
Brucella abortus biovar 1 str. 9–941 | Rhizobiales | Brucellaceae | 3.29 | 57.2 | 3085 | [69] |
Brucella melitensis 16M | Rhizobiales | Brucellaceae | 3.29 | 57.2 | 3198 | [38] |
Brucella melitensis biovar Abortus 2308 | Rhizobiales | Brucellaceae | 3.28 | 57.2 | 3034 | [39] |
Brucella suis 1330* | Rhizobiales | Brucellaceae | 3.32 | 57.3 | 2123 | [40] |
Brucella ovis ATCC 25840 | Rhizobiales | Brucellaceae | 3.3 | 57.2 | 2892 | TIGR |
Mesorhizobium loti MAFF303099* | Rhizobiales | Phyllobacteriaceae | 7.6 | 62.5 | 7372 | [6] |
Mesorhizobium sp. BNC1 | Rhizobiales | Phyllobacteriaceae | 4.94 | 61.1 | 4543 | DOE-JGI |
Agrobacterium tumefaciens str. C58 | Rhizobiales | Rhizobiaceae | 5.67 | 59.0 | 4661 | [37] |
Rhizobium etli CFN 42 | Rhizobiales | Rhizobiaceae | 6.53 | 61.0 | 5963 | [35] |
Rhizobium leguminosarum bv. viciae 3841 | Rhizobiales | Rhizobiaceae | 7.75 | 61.0 | 7263 | [81] |
Sinorhizobium meliloti 1021 | Rhizobiales | Rhizobiaceae | 6.69 | 62.2 | 6205 | [36] |
Caulobacter crescentus CB15* | Caulobacterales | Caulobacteraceae | 4.02 | 67.2 | 3737 | [51] |
Hyphomonas neptunium ATCC 15444 | Caulobacterales+ | Hyphomonadaceae | 3.71 | 61.9 | 3505 | [46] |
Maricaulis maris MCS10 | Caulobacterales+ | Hyphomonadaceae | 3.37 | 62.7 | 3063 | DOE-JGI |
Jannaschia sp. CCS1 | Rhodobacterales | Rhodobacteraceae | 4.4 | 62.2 | 4212 | DOE-JGI |
Paracoccus denitrificans PD1222 | Rhodobacterales | Rhodobacteraceae | 5.25 | 66.8 | 5077 | DOE-JGI |
Rhodobacter sphaeroides 2.4.1* | Rhodobacterales | Rhodobacteraceae | 4.45 | 68.8 | 4242 | DOE-JGI |
Rhodobacter sphaeroides ATCC 17025 | Rhodobacterales | Rhodobacteraceae | 4.54 | 68.2 | 4333 | DOE-JGI |
Rhodobacter sphaeroides ATCC 17029 | Rhodobacterales | Rhodobacteraceae | 4.42 | 69.0 | 4132 | DOE-JGI |
Roseobacter denitrificans OCh 114 | Rhodobacterales | Rhodobacteraceae | 4.3 | 58.9 | 4129 | [44] |
Silicibacter pomeroyi DSS-3 | Rhodobacterales | Rhodobacteraceae | 4.6 | 64.1 | 4252 | [45] |
Silicibacter sp. TM1040* | Rhodobacterales | Rhodobacteraceae | 4.15 | 60.1 | 3864 | DOE-JGI |
Gluconobacter oxydans 621H* | Rhodospirillales | Acetobacteraceae | 2.92 | 60.8 | 2664 | [56] |
Granulibacter bethesdensis CGDNIH1 | Rhodospirillales | Acetobacteraceae | 2.7 | 59.1 | 2437 | Rocky Mountain Lab |
Acidiphilium cryptum JF-5 | Rhodospirillales | Acetobacteraceae | 3.97 | 67.1 | 3564 | DOE-JGI |
Magnetospirillum magneticum AMB-1 | Rhodospirillales | Rhodospirillaceae | 4.97 | 65.1 | 4559 | [57] |
Rhodospirillum rubrum ATCC 11170* | Rhodospirillales | Rhodospirillaceae | 4.41 | 65.4 | 3841 | DOE-JGI |
Candidatus Pelagibacter ubique HTCC1062 | Rickettsiales | - | 1.3 | 29.7 | 1354 | [2] |
Anaplasma marginale str. St. Maries | Rickettsiales | Anaplasmataceae | 1.2 | 49.8 | 949 | [70] |
Anaplasma phagocytophilum HZ | Rickettsiales | Anaplasmataceae | 1.47 | 41.6 | 1264 | [71] |
Ehrlichia canis str. Jake | Rickettsiales | Anaplasmataceae | 1.32 | 29.0 | 925 | DOE-JGI |
Ehrlichia chaffeensis str. Arkansas | Rickettsiales | Anaplasmataceae | 1.18 | 30.1 | 1105 | [71] |
Ehrlichia ruminantium str. Gardel | Rickettsiales | Anaplasmataceae | 1.5 | 27.5 | 950 | [72] |
Ehrlichia ruminantium str. Welgevonden | Rickettsiales | Anaplasmataceae | 1.52 | 27.5 | 888 | [73] |
Neorickettsia sennetsu str. Miyayama | Rickettsiales | Anaplasmataceae | 0.86 | 41.1 | 932 | [71] |
Rickettsia bellii RML369-C | Rickettsiales | Rickettsiaceae | 1.52 | 31.6 | 1429 | [74] |
Rickettsia conorii str. Malish 7 | Rickettsiales | Rickettsiaceae | 1.27 | 32.4 | 1374 | [75] |
Rickettsia felis URRWXCal2 | Rickettsiales | Rickettsiaceae | 1.59 | 32.5 | 1512 | [76] |
Rickettsia prowazekii str. Madrid E | Rickettsiales | Rickettsiaceae | 1.11 | 29.0 | 835 | [77] |
Rickettsia typhi str. Wilmington | Rickettsiales | Rickettsiaceae | 1.11 | 28.9 | 838 | [78] |
Wolbachia endosymbiont (Drosophila)* | Rickettsiales | Rickettsiaceae | 1.27 | 35.2 | 1195 | [79] |
Wolbachia endosymbiont (Brugia malayi) | Rickettsiales | Rickettsiaceae | 1.08 | 34.2 | 805 | [80] |
Erythrobacter litoralis HTCC2594 | Sphingomonadales | Erythrobacteraceae | 3.05 | 63.1 | 3011 | GBM Foundation |
Novosphingobium aromaticivorans DSM 12444* | Sphingomonadales | Sphingomona-daceae | 3.56 | 65.2 | 3937 | DOE-JGI |
Sphingopyxis alaskensis RB2256 | Sphingomonadales | Sphingomona-daceae | 3.37 | 65.5 | 3195 | DOE-JGI |
Sphingomonas wittichii RW1 | Sphingomonadales | Sphingomona-daceae | 5.93 | 67.9 | 5345 | DOE-JGI |
Zymomonas mobilis subsp. mobilis ZM4 | Sphingomonadales | Sphingomona-daceae | 2.06 | 46.3 | 1998 | [53] |