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Table 1 PNA structures and mRNA target sites

From: Variable coordination of cotranscribed genes in Escherichia coli following antisense repression

PNA

Structure

Target site

anti-gfp I

(KFF)3K-eg1-aataacctcc

-11 to -2

anti-gfp II

(KFF)3K-eg1-cgcataaata

-5 to +5

anti-DsRed I

(KFF)3K-eg1-attctgtttcc

-9 to +2

anti-DsRed II

(KFF)3K-eg1-ccattctgtt

-6 to +4

anti-lacZ

(KFF)3K-eg1-catagctgtttc

-9 to +3

anti-lacY

(KFF)3K-eg1-cataatggattt

-9 to +3

anti-lacA

(KFF)3K-eg1-caatgcgatc

-7 to +3

  1. mRNA target sites are shown relative to translation start sites of the respective coding sequences.