From: New PCR systems to confirm real-time PCR detection of Mycobacterium avium subsp. paratuberculosis
Oligo | Nucleotide sequence | 5' annealing position* | Product length |
---|---|---|---|
MPF | 5'-CCG CTA ATT GAG AGA TGC GAT T-3' | 139 | 115 |
MPR | 5'-CCA GAC AGG TTG TGC CAC AA-3' | 253 | |
MP probe | 5'-6-FAM-ACC TCC GTA ACC GTC ATT GTC CAG ATC A-BHQ-1-3' | 231 | |
DH1F | 5'-AAG ACC GAC GCC AAA GAC-3' | 536 | 69 |
DH1R | 5'-CAG AGG CTG CAA GTC GTG-3' | 604 | |
DH1 probe | 5'-6-FAM-GAT CAT CGC CGA TCA GGC CC-BHQ-1-3' | 559 | |
DH2F | 5'-GCC TTC GAC TAC AAC AAG AGC-3' | 737 | 65 |
DH2R | 5'-GCG TCG GGA GTT TGG TAG-3' | 801 | |
DH2 probe | 5'-6-FAM-GCC GCG CTG ATC CTG CTT ACT-BHQ-1-3' | 761 | |
DH3F | 5'-AAC TAA GCG GAT CGA CAA TTC-3' | 493 | 80 |
DH3R | 5'-TGG TGT ACC GAA TGT TGT TG-3' | 572 | |
DH3 probe | 5'-6-FAM-TGC AAC TCG AAC ACA CCT GGG A-BHQ-1-3' | 519 |