Table 2 Non-target strains, tested with the primary and confirmatory PCR systems.
From: New PCR systems to confirm real-time PCR detection of Mycobacterium avium subsp. paratuberculosis
No. of strains | Species | Source | Origin | IS900 MP | IS900 DH1 | IS900 DH2 | F57 DH3 |
|---|---|---|---|---|---|---|---|
1 | MAAa | Horse | Sweden | - | + | - | - |
1 | MAA | Human | ATCC 35718 | - | - | - | - |
1 | MAA | Domestic fowl | ATCC 25291T | - | - | - | - |
6 | MAA | Variousb | Variousc | - | - | - | - |
1 | Mycobacterium species (strain 2333) | Cattle | Sweden | + | - | - | - |
1 | Mycobacterium speciesd | Cat | Sweden | - | - | + | - |
1 | Mycobacterium kansasii | Human | ATCC 12478T | - | - | - | - |
1 | Mycobacterium smegmatis | Cattle | Great Britain | - | - | - | - |
1 | Mycobacterium chelonei | Cattle | Sweden | - | - | - | - |
1 | Mycobacterium fortuitum | Cattle | Sweden | - | - | - | - |
1 | Mycobacterium bovis | Deer | Sweden | - | - | - | - |
1 | Mycobacterium bovis | Cattle | ATCC 19210T | - | - | - | - |
1 | Mycobacterium silvaticum | Dove | Sweden | - | - | - | - |
1 | Mycobacterium intracellulare | Sparrow | ATCC 35767 | - | - | - | - |
1 | Mycobacterium intracellulare | ATCC 13950T | - | - | - | - | |
1 | Mycobacterium intracellulare | Cattle | ATCC 35771 | - | - | - | - |
1 | Mycobacterium scrofulaceum | Human | ATCC 19981T | - | - | - | - |
1 | Mycobacterium gordonae | Human | ATCC 14470T | - | - | - | - |
1 | Mycobacterium marinum | Guppy | Sweden | - | - | - | - |
2 | Mycobacterium marinum | Dolphin | Sweden | - | - | - | - |
1 | Mycobacterium malmoense | Human | CIP 105775T | - | - | - | - |
1 | Mycobacterium celatum | Human | CIP 106109 | - | - | - | - |
1 | Mycobacterium flavescens | Guinea pig | CIP 104533 | - | - | - | - |
1 | Mycobacterium komossense | Sphagnum moss | CIP 105293T | - | - | - | - |
1 | Mycobacterium marinum | Saltwater fish | CIP 104528T | - | - | - | - |
1 | Mycobacterium terrae | Human | CIP 104321T | - | - | - | - |
1 | Mycobacterium vaccae | Cattle | CIP 105934T | - | - | - | - |
1 | Mycobacterium xenopi | Toad | CIP 104035T | - | - | - | - |
1 | Mycobacterium speciese | Turtle | Sweden | - | - | - | - |
1 | Mycobacterium porcinum | Swine | CIP 105392 | - | - | - | - |
1 | Mycobacterium porcinum | Bulk milk | Italy | - | - | - | - |
1 | Mycobacterium hiberniae | Soil | CIP 104537 | - | - | - | - |
1 | Mycobacterium cookii | Sphagnum moss | ATCC 49103 | - | - | - | - |
110 | Mycobacterium species | Variousf | Variousg | - | - | - | - |
1 | Staphylococcus aureus | ATCC 25923 | - | - | - | - | |
1 | Streptococcus dysgalactiae | Cattle | CCUG 27436 | - | - | - | - |
1 | Streptococcus uberis | Cattle | CCUG 27444 | - | - | - | - |
1 | Escherichia coli | ATCC 25922 | - | - | - | - | |
1 | Arcanobacter pyogenes | Cattle | CCUG 39326 | - | - | - | - |
1 | Pseudomonas aeruginosa | Human | CCUG 17619 | - | - | - | - |