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Table 3 Polymorphic sites among tuf-1 and tuf-2 from Brucella.

From: Intrinsic and selected resistance to antibiotics binding the ribosome: analyses of Brucella 23S rrn, L4, L22, EF-Tu1, EF-Tu2, efflux and phylogenetic implications

$Nt position 12 36 141 183 198 219 345 378 511 609 936 1158
#Bru↓|Nt→ T C C T C T C A G A A G C T C T C A G A C T C T
Bab 9–941 X   X   X   X   X   X   X   X   X   X   X   2 1
Bab b1 X   X   X   X   X   X   X   X   X   X   X    X
Bab b2 X   X   X   X   X   X   X   X   X   X   X   2 1
Bab b3 X   X   X   X   X   X   X   X   X   X   X   X  
Bab b4 X   X   X   X   X   X   X   X   X   X   X   2 1
Bab b5 X   X   X   X   X   X   X   X   X   X   X   X  
Bab b6 X   X   X   X   X   X   X   X   X   X   X   X  
Bab b9 X   X   X   X   X   X   X   X   X   X   X   X  
B. suis b1 X   X   X   X   X   X   X   X   X   X   X   X  
B. suis b2 1 2 X   X   X   X   X   X   X    X X   X   X  
B. suis b3 1 2 X   X   X   X   X   X   X   X   X   X   X  
B. suis b4 X   X   X   X   X   X   X   X   X   X   X   X  
B. suis b5 1 2 X   X   X   X   X   X   X   X   X   X   X  
Bmel b1 X    X   X   X   X   X   X   X X   X    X X  
Bmel b2 X    X   X   X   X   X   X   X X   X    X X  
Bmel b3 X    X   X   X   X   X   X   X X   X    X X  
Bneo   X X    X   X   X   X X    X X    X X   X  
B. ovis X   X   X   X   X   X   X   X   X   X   X   X  
B. canis 1 2 X   X   X   X   X   X   X   X   X   X   X  
Seal 1 2 X   X   X   X    X X    X X   X   X   X  
Dolphin 1 2 X   X   X   X    X X    X X   X   X   X  
Porpoise X   X   X   X   X    X X    X X   X   X   X  
  1. $Nt = nucleotide; #Brucella strains, see Table 1; X = tuf-1 and tuf-2 have identical sequences; 1 = tuf-1 sequence only, 2 = tuf-2 sequence only. Polymorphic sites are in bold. tuf-1 and tuf-2 GenBank accession numbers are listed in Materials and methods.