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Table 2 Distribution of homology between the unique set of A. niger singleton and contig sequences and various databases as determined by BLASTX

From: Generation, annotation, and analysis of an extensive Aspergillus niger EST collection

 

Number of genes with similarity

(E ≤ e-5)

Highly significant homology

(E ≤ e-30)

Moderate homology

(e-30< E ≤ e-10)

Weak homology

(e-10< E ≤ e-5)

Insignificant similarity

(e-5< E)

Total GenBank Database set

4321 (83.06%)

3367 (64.73 %)

811 (15.59%)

143 (2.75%)

881 (16.93%)

Set of predicted proteins for A. nidulans

4195 (80.64%)

3313 (63.69%)

682 (13.11%)

200 (3.84%)

1007 (19.36%)

Set of predicted proteins for N. crassa

3615 (69.49%)

2261 (43.46%)

995 (19.13%)

359 (6.90%)

1587 (30.51%)

Set of predicted proteins for P. chrysosporium

2581 (49.62%)

1292 (24.84%)

864 (16.60%)

425 (8.17%)

2621 (50.38%)

Set of predicted proteins for S. cerevisiae

2386 (45.87%)

1110 (21.34%)

803 (15.44%)

359 (6.90%)

2816 (54.13%)