Enzyme/label combination | Fragment | Organism identified, species | strain; type culture collection number | number of plots (out of 24) where strain was detected |
---|---|---|---|---|
Bst-FAM Ă— BstU-JOE | 226/173 | Clostridium botulinum | 202F; ATCC 23387 | 5 |
 |  | Clostridium butyricum | E.VI.3.6.1.; NCIMB 8082 |  |
 |  | Clostridium butyricum | MMP3; DSM 2478 |  |
 |  | Clostridium butyricum | ATCC 43755 |  |
 | 236/173 | Bacillus subtilis |  | 7 |
 |  | unidentified species | 16SX-1 |  |
 |  | unidentified species | 16SX-2 |  |
BstU-JOE Ă— MNL-JOE | 171/93 | Ralstonia solanacearum | ACH 0732 | 24 |
 | 171/93 | Piscirickettsia salmonis |  | 5 |
 | 173/93 | Pirellula sp. (uncultered) | clone 5H12 | 5 |
 |  | Thermoanaerobacterium saccharolyticum | B6A-RI |  |
 | 275/93 | Ferribacterium limneticum | cda-1 | 3 |
 |  | Escherichia coli chloroplast of Marchantia polymorpha |  |  |
BstU-JOE Ă— MNL-FAM | 173/210 | symbiont of Crithidia sp. | Â | 24 |
 | 275/205 | unidentified strain from Gossenköllesee |  | 3 |
 | 275/211 | Azoarcus sp. | PH002 | 7 |
 |  | Azoarcus sp. | CR23 |  |
 |  | Azoarcus sp. | FL05 |  |
 |  | unidentified species | clone A1–13 |  |
 |  | unidentified species | cloneSJA-62 |  |
 | 275/217 | Salmonella typhimurium | E10 NCTC 8391 | 15 |
 | 275/226 | unidentified species | clone SJA-47 | 2 |
MNL-JOE Ă— BstU-FAM | 226/93 | Clostridium algidicarnis | NCFB 2931 (T) | 1 |
BstU-FAM Ă— MNL-FAM | 103/211 | unidentified species | clone SJA-112 | 11 |
 | 219/426 | Frankia sp. | L27 | 1 |
 |  | Kibdelosporangium aridum subsp. aridum |  |  |
 |  | Mycobacterium asiaticum | N6IH; ATCC 25276 |  |
 | 221/129 | Nocardia crassostreae | RB1 | 22 |
 |  | Nocardia crassostreae | OB3 |  |
 | 221/183 | Sulfobacillus disulfidooxidans | SD-11 | 12 |
 |  | Kitasatospora paracochleata | 14769 |  |
 |  | Kitasatospora melanogena | JCM 3337 |  |
 |  | Kitasatospora kifuense | JCM 9081 |  |
 | 236/138 | Leuconostoc citreum | NCDO 2787 | 7 |
 |  | Leuconostoc lactis | ATCC 19256 |  |
 |  | Leuconostoc mesenteroides subsp. mesenteroides | ATCC 8293 |  |
 | 388/210 | Oxalobacter formigenes | BLISS | 12 |
 | 390/211 | Pseudomonas sp. | B13 | 11 |
MNL-FAM Ă— MNL-JOE | 134/93 | Clostridium perfringens | CPN50 | 2 |