VNTR locusa | Consensus sequence(s) of repeat unitb | Length of repeat unit (bp) | Locus in Z2491 | Locus in MC58 | Locus in FAM18 | Function (Reference or locus_tagc) | |||
---|---|---|---|---|---|---|---|---|---|
Location | Number of repeat unit | Location | Number of repeat unit | Location | Number of repeat unit | ||||
NMTR1 (VNTR01) | CAAACAA | 7 | 814844–815018 | 25 | 657240 – 657484 | 35 | 601072 – 601274 | 29 | glycosyl transferase [23] |
NMTR2 | CATTTCT | 7 | 920757 – 920875 | 17 | 773274 – 773301 | 4 | 716022 – 716154 | 19 | Unknown |
NMTR6 | GCTTCAGTTACAGCTTCTTTG | 21 | 1603619 – 1603660 | 2 | 1518318 – 1518359 | 2 | 1407985 – 1408068 | 4 | membrane protein (NMA1680) |
NMTR7 | CAAG | 4 | 1638925 – 1638972 | 12 | 1556771 – 1556814 | 11 | 1444059 – 1444090 | 8 | hypothetical protein (NMB1507) |
NMTR9 (VNTR06 & VNTR08) | GCCAAAGTT | 9 | 2158594 – 2158514 | 9 | 285906 – 285968 | 7 | 277433 – 277666 | 26 | rotamase (NMA2206) |
NMTR9a | CCGCTGCTACTGCCGCTGCTGAAGCACCTG | 30 | 1100635 – 1100694 | 2 | 970825 – 970854 | 1 | 932818 – 932907 | 3 | dihydrolipoamide succinyltransferase E2 component (NMA1150) |
NMTR9b | TACGGCTGCCGCGTCAAA | 18 | 1385171 – 1385206 | 2 | 1293181 – 1293216 | 2 | 1191565 – 1191582 | 1 | murein hydrolase (NMA1488) |
NMTR9c | CGGATACGCTCTTGG | 15 | 1446130 – 1446174 | 3 | 1353481 – 1353510 | 2 | 1250095 – 1250139 | 3 | hypothetical protein (NMA1547) |
NMTR10 | CAGATT | 6 | 2058538 – 2058515 | 4 | 386427 – 386480 | 9 | 1824619 – 1824596 | 4 | DNA-directed RNA polymerase-β-chain (NMA0141) |
NMTR12 (VNTR02) | a:GGGCTGTAGAGAT b: GGCTGTAGAGAT | 13, 12 | 1234098 – 1234135 | 3 = 2a1b | 1131164 – 1311531 | 29 = 20a9b | 1043723 – 1044023 | 24 = 13a11b | Unknown |
NMTR18 | GGGTAGCGG | 9 | 2052950 – 2052967 | 2 | 392028 – 392045 | 2 | 1819003 – 1819047 | 5 | aldose 1-epimerase (NMA2099) |
NMTR19 | CGTATTTTCCCAT | 13 | 2075417 – 2075442 | 2 | 369378 – 369403 | 2 | 1844470 – 1844534 | 5 | Unknown |