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Figure 9 | BMC Microbiology

Figure 9

From: Bioinformatics analysis of the locus for enterocyte effacement provides novel insights into type-III secretion

Figure 9

Multiple alignment of CesT with related type-III secretion chaperones. Organism and gene name abbreviations as follows: As(Aeromonas salmonicida) orfX(gb|AAK83051), Pa(Pseudomonas aeruginosa) PA3842(ref|NP_252531), Cv(Chromobacterium violaceum) CV0975(ref|NP_900645), Pl(Photorhabdus luminescens) unkown(gb|AAO18077), Ye(Yersinia enterocolitica) SycT(ref|NP_783658), Bt(Bordetella pertussis) BP0499(ref|NP_879351), Pl plu4749(ref|NP_931911), Ps(Pseudomonas syringae) SchF(ref|NP_790352), Sf(Shigella flexineri) IpgE(gb|AAP78997), Ye YsaK(gb|AAB69191), Ea(Erwinia amylovora) DspF(gb|AAC04851), Ps AvrF(ref|NP_791203), EPEC(Escherichia coli E2348/69) CesF(gb|AAC38388), Ps Pspto1369(ref|NP_791196) and Pspto4589(ref|NP_794340), Pl plu0829 (ref|NP_928172), Ps Pspto4721(ref|NP_794464), Bt BP2236(ref|NP_880880), Pa ExsC(gb|AAC46214), Pl plu3753(ref|NP_930959), Ye Orf155(ref|NP_783720), Vp VP1687(ref|NP_798066), Ps SchA(ref|NP_795083), Dv Dvu2312(ref|YP_011525), Lm(Leishmania major) L4830.13(emb|CAC22615), Lm P883.10(emb|CAC37204), Ct CT043(ref|NP_219546), Xa(Xanthomonas axonopodis) HpaB(ref|NP_640751), Ps Pspto1374(ref|NP_791201), Vp(Vibrio parahaemolyticus) VP1684(ref|NP_798063), Bt BP2265(ref|NP_880908), Ye YscB(ref|NP_052412), Pa PscB(gb|AAC44773), Pl SctB(ref|NP_930983), Vp NosA(ref|NP_798076), Dv(Desulfovibrio vulgaris) CesT(ref|YP_011605), Ea ORFA(gb|AAF63396), Ct(Chlamydia trachomatis) SycE(ref|NP_219591), Ct CT663(ref|NP_220182), Ye SycH(ref|NP_863547), Vp VP1682(ref|NP_798060), Ye SycN(ref|NP_052398), As(Aeromonas salmonicida) Acr2(emb|CAD30215), Pl plu3764(ref|NP_930970), Pa Pcr2(gb|AAC45941), Vp VP1665(ref|NP_798044), and Bt BP2258(ref|NP_880901). Alignment is presented using default CHROMA settings (see Figure 2 legend).

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