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Table 1 S. pneumoniae strains origin and characteristics

From: Evaluation and selection of tandem repeat loci for Streptococcus pneumoniae MLVA strain typing

Strain id Reference Origin Serotype Year Sitea Country Peni Gb Ery
RP01 100277 AMP (IPP) 12A 2004 CSF Burkina Faso S S
RP02 200801 AMP (IPP) 1 2004 CSF Burkina Faso S S
RP03 300141 AMP (IPP) 12B 2004 CSF Burkina Faso S S
RP04 400202 AMP (IPP) RSGa 2004 CSF Burkina Faso S S
RP05 500205 AMP (IPP) RSG 2004 CSF Burkina Faso S S
RP06 600003 AMP (IPP) 5 2004 CSF Burkina Faso S S
RP07 700025 AMP (IPP) 1 2004 CSF Burkina Faso S S
RP08 800830 AMP (IPP) 6A 2004 CSF Burkina Faso S S
RP09 900518 AMP (IPP) 6A 2004 CSF Burkina Faso S S
RP10 1000244 AMP (IPP) 6A 2004 CSF Burkina Faso S S
RP11 1100236 AMP (IPP) 1 2004 CSF Burkina Faso S S
RP12 1200327 AMP (IPP) 5 2004 CSF Burkina Faso S S
RP13 1300373 AMP (IPP) 5 2004 CSF Burkina Faso S S
RP14 20020876 CHPA 14 2002 Blood France (sud-est) R R
RP15 20020953 CHPA 14 2002 Blood France (sud-est) I S
RP16 20020978 CHPA 18C 2002 Blood France (sud-est) S S
RP17 20021029 CHPA 14 2002 Blood France (sud-est) R R
RP18 20021131 CHPA 23 2002 Blood France (sud-est) I R
RP19 20022003 CHPA 3 2002 Blood France (south-east) S S
RP20 20022042 CHPA 3 2002 Blood France (south-east) S S
RP21 20022215 CHPA 19A 2002 Blood France (south-east) I R
RP22 20022337 CHPA 10A 2002 Blood France (south-east) S S
RP23 20022338 CHPA 23A 2002 Blood France (south-east) I S
RP24 20022339 CHPA 23A 2002 Blood France (south-east) S S
RP25 4030143494 HIA Percy 3 2004 Pulmonary France (Paris area) S S
RP26 488015780 HIA Percy RSGc 2004 Pulmonary France (Paris area) S S
RP27 488019294 HIA Percy NTd 2004 Pulmonary France (Paris area) I R
RP28 4040145233 HIA Percy 9V 2004 Pulmonary France (Paris area) I R
RP29 4050149284 HIA Percy 9V 2004 Pulmonary France (Paris area) R R
RP30 4060150356 HIA Percy RSG 2004 Pulmonary France (Paris area) S S
RP31 4060150868 HIA Percy 9V 2004 Pulmonary France (Paris area) I R
RP32 4060151258 HIA Percy 23 2004 Pulmonary France (Paris area) I R
RP33 488034644 HIA Percy 6A 2004 Pulmonary France (Paris area) S S
RP34 488037640 HIA Percy 19A 2004 Pulmonary France (Paris area) I S
RP35 4070153283 HIA Percy 11A 2004 Blood France (Paris area) S S
RP46 PED012 AMP (IPP) 1 2002 CSF Burkina Faso I S
RP47 MED042 AMP (IPP) 1 2002 CSF Burkina Faso I S
RP48 PED081 AMP (IPP) 1 2003 CSF Burkina Faso S UNe
RP49 MED142 AMP (IPP) 1 2003 CSF Burkina Faso S S
RP50 PED159 AMP (IPP) 1 2003 CSF Burkina Faso S S
RP51 Q06003 AMP (IPP) 25 2003 CSF Burkina Faso S S
RP52 MED126 AMP (IPP) 1 2003 CSF Burkina Faso S S
RP53 Q14004 AMP (IPP) 1 2003 CSF Burkina Faso S S
RP54 PED124 AMP (IPP) 1 2003 CSF Burkina Faso S S
RP55 H01368 AMP (IPP) 1 2003 CSF Burkina Faso S S
  1. (a) Origin of isolate; CSF: Cerebrospinal fluid
  2. (b) Resistance to benzylpenicillin (Pen) or erythromycin (Ery) (S: susceptible; I: intermediate; R: resistant).
  3. (c) RSG rare serogroup
  4. (d) NT non typable
  5. (e) UN unknown