Table 1 Most represented protein domains in the Saprolegnia parasitica EST contigs
InterPro ID | Description | Number of contigs |
|---|---|---|
IPR000719 | Eukaryotic protein kinase | 22 |
IPR004000 | Actin and actin-like | 11 |
IPR001993 | Mitochondrial energy transfer proteins (carrier protein) | 9 |
IPR000626 | Ubiquitin domain | 6 |
IPR002110 | Ankyrin-repeat | 5 |
IPR001680 | G-protein beta WD-40 repeats | 5 |
IPR000795 | GTP-binding elongation factor | 5 |
IPR001353 | Multispecific proteasome proteases | 5 |
IPR003008 | Tubulin/FtsZ family | 5 |
IPR000873 | AMP-dependent synthetase and ligase | 4 |
IPR000254 | Cellulose-binding domain, fungal type | 4 |
IPR002130 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase | 4 |
IPR002048 | EF-hand | 4 |
IPR000173 | Glyceraldehyde 3-phosphate dehydrogenase | 4 |
IPR000232 | Heat shock factor (HSF)-type DNA-binding domain | 4 |
IPR001806 | Ras GTPase superfamily | 4 |
IPR000504 | RNA-binding region RNP-1 (RNA recognition motif) | 4 |
IPR001464 | Annexin family | 3 |
IPR001623 | DnaJ N-terminal domain | 3 |
IPR001753 | Enoyl-CoA hydratase/isomerase | 3 |
IPR001179 | FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase) | 3 |
IPR001005 | Myb DNA binding domain | 3 |
IPR003014 | PAN domain | 3 |
IPR000668 | Papain cysteine protease (C1) family | 3 |
IPR001272 | Phosphoenolpyruvate carboxykinase (ATP) | 3 |
IPR001849 | Pleckstrin homology (PH) domain | 3 |
IPR001232 | SKP1-like | 3 |
IPR000063 | Thioredoxin | 3 |
IPR001440 | TPR repeat | 3 |