Table 3 List of components involved in osmoregulatory switch
From: A simulation model of Escherichia coli osmoregulatory switch using E-CELL system
Substance | Substance Description | Substance_ID |
|---|---|---|
Sucrose | Sucrose | s |
EnvZ | Sensor kinase EnvZ | envz |
EnvZk/EnvZp | EnvZ with Kinase / phosphatase activity | envzk/envzk |
EnvZkP/EnvZpP | Phosphorylated EnvZ with Kinase / phosphatase activity | envzkp/envzpp |
OmpR/OmpRP | Response regulatory OmpR/Phosphorylated OmpR | ompr/omprp |
EnvZpPOmpR EnvZkPOmpR EnvZpOmpRP EnvZkOmpRP | Sensor kinase-regulatory complexes | envzppompr envzkpompr envzpomprp envzkomprp |
F1 F1F2 F1F2F3 F1F2F3F4 | ompF gene promoter sites | f1 f1f2 f1f2f3 f1f2f3f4 |
C1 C1C2 C1C2C3 | ompC gene promoter sites | c1 c1c2 c1c2c3 |
F1OmpRP F1F2 OmpRP F1F2F3 OmpRP F1F2F3F4 OmpRP C1 OmpRP C1C2 OmpRP C1C2C3 OmpRP | Response regulator-promoter complex | f1omprp f1f2omprp f1f2f3omprp f1f2f3f4 omprp c1omprp c1c2omprp c1c2c3omprp |
ATP | ATP | ATP |
OmpF | Porin OmpF | ompf |
OmpC | Porin OmpC | ompc |