Table 1 Genetic variation in MLST and drg loci
From: Dam inactivation in Neisseria meningitidis: prevalence among diverse hyperinvasive lineages
Locus | No. of alleles (no./100 isolates) | No. (%) of polymorphic sites | dN/dS | Average p-distance | %G+C |
|---|---|---|---|---|---|
abcZ | 15 (14) | 75 (17.4) | 0.05 | 0.052 | 51.1 |
adk | 10 (9.4) | 17 (3.7) | 0.02 | 0.012 | 52.3 |
aroE | 18 (16.8) | 166 (34) | 0.293 | 0.106 | 55.6 |
fumC | 19 (17.8) | 38 (8.2) | 0.024 | 0.022 | 57.4 |
gdh | 16 (15) | 28 (5.6) | 0.05 | 0.019 | 52.3 |
pdhC | 24 (22.4) | 80 (16.7) | 0.07 | 0.054 | 55.9 |
pgm | 21 (19.6) | 77 (17) | 0.121 | 0.050 | 54.2 |
drg | 19 (31.1*) | 48 (7.4) †| 0.11 | 0.021 | 42.4 |