Agent | Priority Level | Targeted gene | Plasmid | Genbank access n° | Forward primer | Reverse primer |
---|---|---|---|---|---|---|
Bacteria | ||||||
Bacillus anthracis | A | pag | CatA | AF065404 | 5'-AGGCTCGAACTGGAGTGAA-3' | 5'-CCGCCTTTCTACCAGATTT-3' |
Yersinia pestis | A | pla | CatA | M27820 | 5'-ATGGAGCTTATACCGGAAAC-3' | 5'-GCGATACTGGCCTGCAAG-3' |
Francisella tularensis | A | fop A | CatA | AF097542 | 5'-TAATAATTTCATTGCTCCTTTTG-3' | 5'-TTCTATCTTGAGGACCCCAA-3' |
Brucella spp. | B | omp 19 | CatB | L27997 | 5'-CCGGTGAACTGGCTAATCT-3' | 5'-TGAAGAATAGAGCGAGGCAA-3' |
Burkholderia mallei | B | fl iC | CatB | AF11790 | 5'-GACGCTGGCGCTGTCGA-3' | 5'-CGGCTTGTTGACCGCGTT-3' |
B. pseudomallei | B | CatB | U82287 | |||
Chlamydia psittaci | B | omp A | CatB | AF269265 | 5'-ATTGCTTCGATTCAGATCAAC-3' | 5'-ACCAGTGATTGACCATTTGT-3' |
Coxiella burnetii | B | sod B | CatB | M74242 | 5'-CTTTTTACCGACTCCGCAAA-3' | 5'-ACGAGCGTTGACAGTGCTT-3' |
Rickettsia prowazekii | B | omp B | CatB | AF161079 | 5'-GCTCTTATGAATAATAATGCTC-3' | 5'-TGTTGTAACGCAGCATTAACA-3' |
Rickettsia rickettsii | B | omp A | CatB | U83451 | 5'-TTTGGTGGAGCTCATAAGTTA-3' | 5'-GTACTATATTTGTTGTATTAAAAG-3' |
Rickettsia akari | - | omp B | CatVEF | AF123707 | 5'-TTGGTGGGAATAATTGTAATGT-3' | 5'-TGCAGCAAAATTGAATTCTG-3' |
Viruses | ||||||
Variola virus | A | Hemagglutinin | CatA, CatVEF | AF377893 | 5'-GACKTCSGGACCAATTACTA-3' | 5'-TTGATTTAGTAGTGACAATTTCA-3' |
Monkeypox virus | - | Hemagglutinin | CatVEF | AF375114 | 5'-AAAGTAGATTATGAAGAATACTC-3' | 5'-CAGAAATAGTTTCGACAATTTCA-3' |
Orthopoxvirus | - | Hemagglutinin | CatVEF | AF377892 | 5'-ACCAAGGATAAARTATCWTACG-3' | 5'-ATAYATAAGTACCCGGCATCT-3' |
Varicella- zoster virus | - | IE 62 transactivator | CatVEF | X04370 | 5'-GGTTAAACGTTTGAATCCATC-3' | 5'-CAGCAGACTTTCTCGAACG-3' |
Herpes simplex virus 1 and 2 | - | DNA polymerase | CatVEF | X14112 | 5'-CCGACCCGGAGAGGGAC-3' | 5'-CCAGGCGCTTGTTGGTGT-3' |