Table 3 Genes containing coding tandem repeats with differing copy numbers.
From: Diversity in coding tandem repeats in related Neisseria spp.
Tandem repeat | NMA#* | NMB# †| XNG# ‡ | Gene annotation § | Repeats noted previously? |
|---|---|---|---|---|---|
TR1 | NMA0227 | NMB2141 | XNG1829 | hypothetical protein | no |
TR2 | NMA0257 | NMB0010 | XNG1803 | phosphoglycerate kinase (pgk) | no |
TR3 | NMA0338 | NMB2092 | XNG1869 | hypothetical protein | no |
TR4 | NMA0440 | NMB2001 | XNG1095 | conserved hypothetical protein | no |
TR5 | NMA0650 | NMB1812 | XNG0088 | PilQ protein (pilQ) || | yes |
TR6 | NMA0702 | NMB0525 | XNG0120 | aluminium resistance protein, putative | no |
TR7 | NMA0789 | NMB0586 | XNG0151 | adhesin, putative | no |
TR8 | NMA1150 | NMB0956 | XNG0849 | SucB protein (sucB) | no |
TR9 | NMA1461 | NMB1027 | XNG0526 | DnaJ protein, truncation (dnaJ) | no |
TR10 | NMA1491 | NMB1281 | XNG0596 | transcription-repair coupling factor (mfd) | no |
TR11 | NMA1547 | NMB1333 | XNG0546 | conserved hypothetical protein | no |
TR12 | NMA1612 | NMB1395 | XNG0677 | alcohol dehydrogenase, zinc-containing | no |
TR13 | NMA1680 ¶ | NMB1468 | XNG0955 | hypothetical protein | no |
TR14 | NMA1692 | NMB1483 | XNG0967 | lipoprotein NlpD, putative | no |
TR15 | NMA1723 | NMB1523 | XNG0903 | Lip (H.8 antigen) protein ** | yes |
TR16 | NMA1887 | NMB1623 | XNG1179 | major anaerobically induced OMP (aniA) ††| yes |
TR17 | NMA1897 | NMB1643 | XNG1189 | translation initiation factor IF-2 (infB) | no |
TR18 | NMA1977 | NMB1723 | XNG1268 | cytochrome c oxidase, subunit III (fixP) | no |
TR19 | NMA1985 | NMB1730 | XNG1276 | TonB protein (tonB) ‡‡ | no |
TR20 | NMA2065 | NMB0419 | XNG1419 | conserved hypothetical protein (dcaC) §§ | yes |
TR21 | NMA2105 | NMB0382 | XNG1455 | outer membrane protein class 4 (rmpM) || || | no |
TR22 | NMA2206 | NMB0281 | XNG1595 | peptidyl-prolyl cis-trans isomerase | no |
TR23 | ¶¶ | ¶¶ | XNG0938 | hypothetical protein | no |
TR24 | ¶¶ | NMB1848 | ¶¶ | hypothetical protein | no |
TR25 | ¶¶ | ¶¶ | XNG0481 | hypothetical protein | no |
TR26 | NMA0386 | NMB2050 | XNG1916 | conserved hypothetical protein | no |
TR27 | NMA1515 | NMB1301 | XNG0578 | 30S ribosomal protein S1 (rpsA) | no |
TR28 | NMA2213 | NMB0274 | XNG1602 | DNA helicase RecQ (recQ) *** | no |